May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [H:0089] and [I:0096]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.1
F -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.2 0 -0.1 0 0.4 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
D -0.2 0 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0.7 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.3 -0.1 0.1 0.4 0.3 0.4 0 0 0 0 0 0 0 0 0 -0.3 -0.2 0 -0.1 0.6
R 0.2 0.4 0.3 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0 0 0
H 1.5 -0.1 -0.1 -0.1 -0.7 -0.1 0 0 0 0 0 0 0 0 0 -0.3 0.2 0 0.3 -0.1
N 0.1 0.1 0.4 -0.2 0.3 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 1.1 -0.1 -0.1 -0.3
Q 0.2 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
S -0.2 0 -0.1 0 0.6 0 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0 0 0
T 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0.9 -0.3 0 0 0.1
G 0 0 -0.1 0 0.6 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1
P -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.2 0 0.4 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0089 -0.4 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 0 0.1 -0.4 1.1 0.5 0.6 1.6 -0.2 0 0.6 0.2 -0.5 -0.2
0096 1.2 0 0.7 -0.1 0.8 -0.1 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0.3 0.5 -0.3 -0.1 0.2
Select residue pair below:
i_j Score Prob
0089_0096 1.212 0.71
0068_0096 1.091 0.59
0096_0145 0.940 0.43
0096_0110 0.922 0.41
0071_0096 0.813 0.30
Local Interactions:
i_j Score Prob
0095_0096 1.319 0.79
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0056 seconds.