May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [R:0086] and [S:0117]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 0 -0.1 -0.2 -0.1 -0.1 0 0 -0.1 0.6 -0.2 -0.1 -0.1 0.7 -0.1 0 -0.1 -0.1 0 0
F -0.2 0 0 0.4 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 0 0 0 0
I -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0
L 0.4 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 0 0 0 0
V -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0.4 0 0 0 0 -0.1 0 0 0 0
M -0.4 0 0 -0.1 0 0 0 0 0 0.3 -0.1 0 0 -0.1 0.5 -0.1 0 0 0 0
W -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0
Y -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0
D -0.2 0 -0.1 -0.1 -0.1 0 0 0 0 0.2 -0.2 -0.1 0 -0.1 -0.1 1.4 -0.1 -0.1 0 0
E 1.2 -0.1 0.3 0 -0.2 -0.1 -0.1 -0.1 -0.1 -0.5 0.7 0.1 -0.1 -0.3 0.2 -0.7 0.4 -0.2 -0.1 -0.1
K 0.6 0 -0.1 0.2 0.3 0.4 0 0 -0.1 -0.1 0.4 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0 0
R 0.1 0 -0.1 0.1 -0.1 -0.1 0 0 -0.1 0.4 0.1 0 -0.1 -0.2 0.3 0.3 0.3 -0.1 -0.1 0
H -0.3 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0.5 0 0.1 0 0 0 0
N -0.1 0 0 -0.1 0 0 0 0 0.5 -0.2 0.3 -0.1 0 -0.1 -0.1 -0.3 -0.1 0.4 0.1 0
Q 0.1 0 -0.1 0.1 0 -0.1 0 0 -0.1 -0.3 -0.2 0.3 0.4 -0.2 -0.1 1.2 -0.1 -0.1 -0.1 0
S -0.4 0 0.4 0.2 0.4 -0.1 0 0 -0.1 0.1 -0.2 -0.1 -0.1 0.3 -0.1 0.2 -0.1 -0.1 0 0
T 0.2 0 0 -0.1 0 0 0 0 0 0.8 -0.1 0 0 -0.1 0 -0.2 0 0 0 0
G 0.2 0 -0.1 0.2 -0.1 -0.1 0 0 -0.1 0 -0.2 0.1 -0.1 0.2 -0.1 -0.1 -0.1 0.4 0 0
P -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0
C 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0086 0.7 -0.5 -0.8 -0.4 -0.4 -0.3 -0.8 -0.8 0.4 0.9 0.9 1 -0.4 0.2 0.9 0.6 0.1 0.7 -0.8 -0.7
0117 2.3 -0.7 -0.3 0.6 -0.1 -0.4 -0.7 -0.7 -0.4 0.7 0.5 -0.1 -0.4 0.3 0 1.4 -0.2 -0.2 -0.6 -0.7
Select residue pair below:
i_j Score Prob
0086_0131 0.881 0.37
0086_0117 0.863 0.35
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0057 seconds.