May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RatApobecStart Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [I:0080] and [S:0142]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0.2 -0.1 -0.1 0.4 -0.1 -0.2 -0.1 -0.1 0.1 0.3 0.3 -0.4 -0.1 -0.2 -0.5 0.5 0.3 1.1 -0.1 -0.1
L -0.1 0 0 -0.1 0 -0.3 0 0 0 0.2 -0.3 -0.1 0 0.2 1.1 -0.2 -0.2 -0.2 0 -0.1
V -0.1 -0.1 -0.1 -0.2 -0.1 0.4 -0.1 -0.1 0.1 0.1 0.3 0.6 -0.1 0 -0.2 -0.2 0.2 -0.5 -0.1 0.1
M 0 0 0 0 0 0.4 0 0 0 -0.1 -0.1 0.2 0 0 0 -0.1 0 -0.1 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0080 -0.2 -0.2 1.6 1 0.8 0.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 -0.2 -0.2
0142 -0.1 -0.3 -0.3 0.1 -0.3 0.3 -0.3 -0.3 0.1 0.5 0.3 0.3 -0.3 -0.1 0.5 0 0.2 0.4 -0.3 -0.2
Select residue pair below:
i_j Score Prob
0066_0080 1.030 0.52
0080_0097 1.002 0.49
0064_0080 0.970 0.46
0058_0080 0.962 0.45
0080_0142 0.905 0.39
0080_0121 0.834 0.32
Local Interactions:
i_j Score Prob
0080_0081 1.119 0.62
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...

Page generated in 0.0077 seconds.