May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0043] and [S:0069]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0 -0.1 -0.1 0 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
E -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 1.4 0.6 -0.1 -0.1 -0.1
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.2 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 -0.1 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.3 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0043 0.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 2.2 0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 -0.2 0.2 -0.2
0069 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 -0.1 -0.1 -0.1 0.6 1 -0.1 -0.1 -0.1
Select residue pair below:
i_j Score Prob
0069_0084 1.790 0.97
0066_0069 1.531 0.91
0047_0069 1.379 0.83
0022_0069 0.926 0.41
0043_0069 0.853 0.34
0065_0069 0.823 0.31
0069_0097 0.782 0.27
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0056 seconds.