May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [H:0041] and [V:0042]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 0
H 1.2 -0.1 -0.1 -0.1 0.9 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.1 -0.1 -0.1 0 -0.1
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0.4 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0.5 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0
C -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0041 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.3 1.1 0 -0.2 0.2 -0.2 0.4 0.2 0.2
0042 0.5 -0.2 -0.2 -0.2 0.9 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 0.1 0.3 -0.2 0.9 -0.2
Select residue pair below:
i_j Score Prob
0042_0121 0.942 0.43
0042_0076 0.915 0.40
0042_0079 0.803 0.29
0042_0065 0.797 0.29
Local Interactions:
i_j Score Prob
0041_0042 1.369 0.83
0042_0044 0.845 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0513 seconds.