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Coupling matrix for [T:0038] and [W:0066]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 0 -0.1 0 0 0.7 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
F 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
I 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
L 0 -0.1 0 -0.1 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0.1
V 0 -0.1 0.4 -0.1 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
M 0 -0.1 0 0.4 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.2
W 0 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Y 0 0 0 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.2
D 0 -0.1 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
E 0 -0.1 0 -0.1 0 0 -0.6 0 0 0 0 0 0 0 0 0 0 0 0 1.1
K 0 -0.1 0 -0.1 0 0 -0.8 0 0 0 0 0 0 0 0 0 0 0 0 1.4
R 0 0 0 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.2
H 0 0.3 0 -0.1 0 0 -0.3 0 0 0 0 0.4 0 0 0 0 0 0 0 -0.3
N 0 0 0 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Q 0 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
S 0 -0.1 0 -0.1 0 0 0.3 0 0 0 0.3 0 0 0 0 0 0 0 0 -0.2
T 0 0.4 0 -0.1 0 0 0.9 0 0 0 0 0 0 0 0 0 0 0 0 -0.5
G 0 0.3 0 0.3 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0.3
P 0 -0.1 0 -0.1 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0.3
C 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0038 0.7 -0.6 -0.7 0.2 0.3 -0.3 -0.9 -0.5 0 0.4 0.7 -0.2 -0.2 0 -0.9 0.4 0.9 0.6 0.5 -0.6
0066 -0.1 0.3 0.1 0.4 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.7
Select residue pair below:
i_j Score Prob
0038_0066 1.120 0.62
Local Interactions:
i_j Score Prob
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
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