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Coupling matrix for [R:0027] and [Y:0055]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 1.4 -0.3 -0.3 0 0.2 -0.1 0 -0.1
F 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
I 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0.7 -0.1 0 0 0 0 0
L -0.1 0 0 -0.1 0 0 0 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.3 0 0.5 0 0 0
V 0.4 0 0 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 -0.2 0.4 0 0 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.1 -0.1 0 0 0.3 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
Y -0.1 0 -0.1 -0.1 0 0 0 0.4 -0.1 -0.1 0.2 -0.1 -0.1 0.2 -0.1 0 -0.1 0 0 0
D 0 0 -0.1 0.4 0.4 0 -0.1 -0.1 0.3 0.3 -0.1 -0.1 0.3 -0.2 -0.3 0 -0.1 -0.1 0 0
E -0.1 0 -0.1 -0.1 -0.1 0 -0.1 0 -0.1 0.9 -0.1 -0.1 -0.2 -0.2 0.7 0 -0.1 -0.1 0 0
K 0.3 0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.9 -0.2 0 -0.1 -0.1 0 0.1
R -0.1 0 0.1 0.4 0 0 0.4 0.4 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.2 0 -0.1 -0.1 0 0
H 0 0 0.3 0 0 0 0 0 0 0 0.2 0 -0.1 -0.1 -0.1 0 0 0 0 0
N 0.4 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0 0 0 0 0
Q 0 0 0.2 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0
S -0.4 0 0.1 -0.4 0.1 -0.1 -0.3 -0.4 0.6 -0.3 0.4 0.8 0.6 0.2 -0.3 0.2 -0.1 -0.3 -0.1 0.2
T -0.1 -0.1 -0.1 -0.2 -0.1 0 -0.1 0.1 0 -0.2 0.3 -0.1 -0.2 0.1 0.5 -0.1 -0.1 0.5 0 -0.1
G 0.2 0 0 0.7 -0.1 0 -0.1 0.3 -0.2 -0.1 -0.2 0.3 -0.3 0.2 0 -0.1 0 -0.1 0 -0.1
P 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0.3 0 0 0
C 0 0 0 0 0 0 0.5 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0027 0.4 -0.8 -0.4 -0.2 -0.4 -0.6 -0.8 -0.1 0.3 0.4 0.3 0 -0.5 -0.4 -0.7 2.1 1 0.8 -0.3 -0.6
0055 0.2 -0.4 -0.2 0.1 -0.3 -0.7 -0.2 0 0.1 -0.1 0.1 0 0.6 0.7 0.7 -0.5 0 -0.2 -0.7 -0.4
Select residue pair below:
i_j Score Prob
0027_0055 0.821 0.31
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
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