May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0022] and [I:0064]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 -0.1 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 -0.2 -0.1 -0.1 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 -0.1 0.7 0.3 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 -0.1 1.1 0.1 -0.3 -0.1 0 0 0 0 0 0 0 0.4 0 -0.1 0 0 -0.1 0
V -0.1 0.3 0.1 0.3 0.6 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 0.1 -0.1
M 0 0 -0.1 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 -0.1 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 -0.2 0.3 0 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0 0
G 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0022 -0.1 0 0.6 1.2 0.6 0 -0.3 -0.3 -0.3 -0.3 -0.3 0 -0.3 -0.3 -0.3 0.2 0.6 -0.3 -0.3 -0.3
0064 -0.2 0.2 1 0.7 0.7 0.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 0.1 -0.2 -0.2 -0.1 -0.2
Select residue pair below:
i_j Score Prob
0064_0077 1.371 0.83
0022_0064 1.071 0.57
0064_0071 1.030 0.52
0064_0080 0.970 0.46
0064_0109 0.842 0.33
0064_0099 0.825 0.31
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0167 seconds.