May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0015] and [Y:0020]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0.2 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0.3
I 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0.6 0 0 0 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 -0.1
V 0 -0.1 0 0 0 0 0 0.4 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
M 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
W 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.3 0 0 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1
D 0 0.1 0 0 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0.3
E 0 0.3 -0.1 0 -0.1 0 0 0.2 0 0 0 0 -0.3 0 0 0.7 0 0 0 0.2
K 0 0 0 0 -0.1 0 0 1 0 0 0 0 -0.1 0 0 -0.1 0 0 0 -0.3
R 0 0.5 0 0 -0.1 0 0 0.2 0 0 0 0 -0.1 0 0 -0.1 0 0 0 0.1
H 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.2 0 0 -0.1 0 0 0.3 0 0 0 0 0.4 0 0 0 0 0 0 -0.1
Q 0 0 0 0 -0.1 0 0 -0.1 0 0 0 0 0.9 0 0 -0.1 0 0 0 -0.1
S 0 1 0 0 -0.1 0 0 -0.5 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
T 0 -0.5 0.4 0 0.2 0 0 0.2 0 0 0 0 -0.2 0 0 -0.1 0 0 0 0.6
G 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.4 0 0 0 0 0 0.8 0 0 0 0 0 0 0 0 0 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0015 -0.4 0 -0.6 0 0 -0.6 -0.6 -0.2 0 0.9 0.4 0.8 -0.6 0.2 0.7 0.1 0.5 -0.6 -0.6 0.1
0020 -0.3 1 0 -0.2 0.4 -0.3 -0.3 1.1 -0.3 -0.3 -0.3 -0.3 0.3 -0.3 -0.3 0.2 -0.3 -0.3 -0.3 0.6
Select residue pair below:
i_j Score Prob
0016_0020 1.253 0.74
0020_0057 1.086 0.58
0017_0020 0.961 0.45
0015_0020 0.888 0.37
0020_0128 0.836 0.32
Local Interactions:
i_j Score Prob
0018_0020 1.279 0.76
0019_0020 1.138 0.64
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0097 seconds.