OPENSEQ.org -1517593014- GREMLIN Submission

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Coupling matrix for [V:0005] and [Y:0055]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	0	-0.1	-0.1	0	0	-0.1	0.1	-0.1	0	-0.1	0.2	0	0	0	0.3	0	-0.1	0	-0.1
F	0.1	0	0.2	-0.1	-0.1	-0.1	-0.1	0.5	-0.1	0.5	0.1	0	0.6	0	0	-0.1	-0.2	-0.2	-0.1	-0.1
I	0	0	0	0	0	0	0	0	0	0	0.1	0	0	-0.1	-0.1	0	0	0	0	0
L	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0	0	0.6	0	0
V	-0.1	0	-0.1	0	0	0	0	0.1	-0.1	-0.1	-0.1	0.3	0.6	-0.2	-0.2	-0.1	0	0	0	0.3
M	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
W	0	0	0	0	0	0	0	0	0.4	0	0	0	-0.1	-0.1	-0.1	0	0	0	0	0
Y	-0.1	0.2	-0.1	0.3	-0.1	0	-0.1	-0.1	0.6	-0.1	0.2	-0.2	-0.2	-0.3	0.4	-0.1	-0.1	-0.1	0	-0.1
D	-0.1	0	0.1	-0.1	0	0	0	0	-0.1	0	0.3	0.3	0.4	0.2	-0.2	0	0	0	0	0
E	-0.1	0	-0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0.9	0.1	0	0.1	-0.1	0	0
K	-0.1	0	0	0.4	0	0	0	-0.1	-0.1	0	-0.1	-0.1	-0.1	0.2	-0.1	0	0	0	0	0
R	0.3	0	-0.1	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	0.1	0.1	-0.2	0	0.3	-0.1	0	0
H	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
N	0	0	0	0	0	0	0.4	0	0	0	0.4	0	-0.1	-0.1	-0.1	0	0	0	0	0
Q	-0.1	0	0.4	-0.1	0	0	0	-0.1	0.1	0	-0.1	-0.1	-0.1	0.7	0.2	0	-0.1	-0.1	0	0
S	-0.1	0	-0.1	-0.1	0.4	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.2	-0.2	0.6	0	-0.1	0.1	0	0
T	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
G	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0.2	0	0	0	0	0
P	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0005	0.2	0.6	-0.2	-0.2	0	-0.5	-0.2	0.2	0.3	0.3	0.1	0.4	-0.5	-0.1	0.4	0.4	-0.5	-0.1	-0.5	-0.5
0055	0.2	-0.4	-0.2	0.1	-0.3	-0.7	-0.2	0	0.1	-0.1	0.1	0	0.6	0.7	0.7	-0.5	0	-0.2	-0.7	-0.4

Select residue pair below:

i_j	Score	Prob
0055_0097	1.063	0.56
0027_0055	0.821	0.31
0005_0055	0.807	0.29

Local Interactions:

i_j

Score

Prob

See all coupling residues
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