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Coupling matrix for [R:0123] and [C:0134]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.3 0 -0.2 -0.1 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0.3 0
F -0.2 0.8 -0.5 0.5 -0.3 -0.2 0 0 -0.1 0 0 0.4 0 -0.1 -0.1 -0.1 0 0 -0.3 -0.1
I -0.1 0.1 -0.2 0.1 -0.2 -0.1 0 0 -0.1 0 0 0 0 0 0.5 0 0 0 -0.1 0
L 0.1 -0.1 0.5 -0.1 0 -0.3 0 0 -0.1 -0.1 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.4 0.7 -0.1
V -0.1 0 -0.3 0.1 -0.2 -0.1 0 0 0.9 0 0 0 0 0 0 -0.1 0 0 -0.1 0
M -0.1 0 -0.2 0 -0.2 -0.1 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0.8 0
W -0.1 0 -0.2 0 0.1 -0.1 0 0 0 0.5 0 0 0 0 0 -0.1 0 0 -0.1 0
Y -0.4 0.2 -0.1 -0.1 -0.7 0.1 -0.1 -0.1 0.8 -0.1 -0.1 -0.2 -0.1 0.2 -0.2 0.4 -0.1 -0.1 -0.6 0.5
D 0 0 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
E 0.4 0 -0.2 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
K -0.4 -0.2 0.5 -0.1 1.3 1.3 -0.1 -0.1 -0.3 -0.1 -0.1 -0.2 -0.1 -0.2 -0.3 0.4 -0.1 -0.1 -0.6 -0.1
R 0.5 -0.3 2 -0.2 1.1 0.5 -0.1 -0.1 -0.4 -0.2 -0.1 -0.2 -0.1 -0.3 -0.3 -0.5 -0.2 -0.2 0.8 0.1
H -0.2 -0.1 0.3 -0.1 -0.1 -0.3 0 0 0.3 0 0 -0.1 0 0.4 -0.1 0.1 0 0 0.4 -0.1
N -0.1 -0.1 -0.4 0 -0.3 0.2 0 0 -0.1 0 0 0.5 0 0.4 -0.1 0.3 0 0 -0.2 0
Q 0.4 -0.1 0.3 -0.1 1.3 0.6 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.2 -0.1 -0.1 0.2 -0.1
S -0.1 0 -0.3 0 -0.2 -0.1 0 0 -0.1 0 0 0 0 0 0 0.2 0 0 -0.1 0
T 0 0 -0.3 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0.3 0
G 0 0 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
P 0 0 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
C 0.9 -0.2 0.3 -0.2 0.1 -0.2 -0.1 -0.1 0 0.1 0 -0.2 -0.1 0.2 1.2 0.1 0.2 -0.2 -0.6 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0123 -0.3 0.1 -0.5 0.3 -0.4 -0.4 -0.5 1 -0.9 -0.7 1.2 1.7 0.2 0 1 -0.4 -0.4 -0.9 -0.9 1.3
0134 0.7 -0.3 1.9 -0.6 1.6 1 -1 -1 0.2 -0.6 -0.9 -0.5 -1 -0.1 -0.1 0.3 -0.8 -0.7 1.4 -0.5
Select residue pair below:
i_j Score Prob
0123_0134 1.066 0.75
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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