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Coupling matrix for [S:0016] and [D:0028]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 0.2 0.1 0.2 -0.1 0.3 0.2 0.3 0.4 0.1 -0.1 -0.2 -0.2 -0.1 -0.3 -0.1 -0.5 -0.2 0
F 0 0 0 0.2 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0 0 0.2 0.3 0 -0.1 -0.1 0
I 0 0 0 0 0 0 0 0 0.2 0 0.1 0 0 0 0 0 0 -0.1 0 0
L -0.1 -0.1 0 0.3 0 -0.1 -0.1 0 -0.2 -0.1 0.5 0.2 -0.1 -0.1 -0.1 0.5 -0.1 -0.2 -0.1 0
V 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0.3 -0.2 -0.2 0.1 0.4 0.2 -0.1 0.2 -0.1 -0.1 -0.1 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0.4 0 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 0 -0.1 0.2 0
Y -0.1 -0.1 0 -0.3 -0.1 -0.1 0.1 0 -0.1 0.3 -0.1 0.1 0.2 0.3 0.2 -0.1 -0.1 -0.1 0.2 0
D -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 -0.1 -0.1 0.1 0.2 -0.1 -0.1 -0.1 -0.1 0.6 0.2 -0.1 0
E -0.1 0.3 -0.1 -0.2 0 -0.1 0.4 0 0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.6 -0.1 0
K -0.1 -0.1 -0.1 0.1 0 -0.1 -0.1 0 -0.2 -0.2 0.3 0.4 -0.1 0.2 -0.1 0 -0.1 -0.2 0.3 0
R 0.4 -0.2 0.5 0.2 0 -0.1 -0.1 -0.1 -0.2 0 -0.2 0.7 0 0.3 0.2 -0.1 -0.1 -0.3 -0.3 0
H 0 0.3 0 -0.1 0 -0.1 0.3 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 0 -0.1 -0.1 0
N 0 -0.1 0.2 -0.1 0 0.1 -0.1 0 -0.1 0.3 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0
Q -0.1 0.6 -0.1 0.4 -0.1 -0.1 -0.1 0 -0.2 -0.2 0 0.1 0.4 -0.1 -0.2 0.2 -0.1 0.1 -0.1 0
S 0.3 -0.2 -0.2 -0.2 0.2 -0.3 -0.2 -0.1 0.1 0.3 -0.1 -0.6 -0.2 -0.3 0.4 0 0.2 0.4 0.4 -0.1
T 0 -0.1 0 -0.1 0 0.4 -0.1 0 -0.1 -0.1 -0.1 -0.2 0 -0.1 -0.1 0.1 0 0.5 -0.1 0
G 0 0 0 -0.1 0 0 0 0 0.3 -0.1 0.1 -0.1 0 -0.1 -0.1 0 0.3 -0.1 0 0
P -0.1 -0.1 -0.1 -0.1 0 0.4 -0.1 0 0.1 -0.2 -0.1 -0.2 -0.1 0.8 0.4 -0.1 -0.1 -0.3 -0.1 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0016 0.2 -0.3 -0.4 -0.1 0.1 -0.5 -0.2 0 0.1 0.1 0.3 0.3 0 0.1 0.4 0.3 -0.1 -0.1 0.1 -0.5
0028 -0.3 0 -0.1 0.1 -0.3 -0.1 -0.2 -0.5 0.2 0.2 0.2 0.3 -0.2 0 0.1 0.6 0 0.4 -0.2 -0.7
Select residue pair below:
i_j Score Prob
0020_0028 1.243 0.88
0010_0028 0.925 0.59
0019_0028 0.907 0.57
0016_0028 0.900 0.56
0003_0028 0.879 0.53
0004_0028 0.875 0.53
0028_0031 0.851 0.50
0028_0048 0.843 0.49
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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