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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0165 0.9 -0.7 -0.1 -0.1 0.5 -0.1 -0.6 0.2 0.1 0.4 0.4 0.3 -0.4 -0.5 0.5 0.1 -0.1 -0.4 -0.5 -0.5
Select residue pair below:
i_j Score Prob
0035_0165 1.070 0.75
0158_0165 1.030 0.71
0147_0165 0.874 0.53
0162_0165 0.820 0.46
Local Interactions:
i_j Score Prob
0165_0166 1.088 0.77
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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