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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0152 -0.3 -0.7 -0.4 -0.4 -0.6 -0.7 -0.7 -0.2 0.7 0.9 -0.3 0.3 -0.2 -0.4 -0.1 -0.1 -0.4 1.4 0.2 -0.5
Select residue pair below:
i_j Score Prob
0004_0152 1.163 0.83
0012_0152 1.002 0.68
0029_0152 0.909 0.57
0020_0152 0.796 0.43
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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