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Apobec Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0136 0.1 0.3 -0.5 0.6 -0.6 -0.9 -1 0.1 0.4 -0.2 0.7 0.3 -0.4 0.7 -1 1.3 1.3 0.7 -0.7 -0.4
Select residue pair below:
i_j Score Prob
0111_0136 0.949 0.62
0126_0136 0.775 0.40
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...

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