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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0129 0.2 -0.6 -0.2 -0.2 0.3 -0.6 -0.3 -0.6 0.3 0 -0.1 0.5 0.3 0.1 0.1 0 -0.2 1.3 0 -0.1
Select residue pair below:
i_j Score Prob
0085_0129 0.920 0.58
0129_0135 0.912 0.57
0093_0129 0.901 0.56
0129_0148 0.812 0.45
0084_0129 0.788 0.42
Local Interactions:
i_j Score Prob
0129_0130 0.876 0.53
0129_0131 0.799 0.43
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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