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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0109 0.1 0.3 -0.3 0.1 -0.3 -0.3 -0.3 -0.1 0 -0.3 0.3 0.1 0.6 -0.1 0.1 0.2 0.1 0.3 -0.3 0.2
Select residue pair below:
i_j Score Prob
0109_0122 1.118 0.80
0109_0125 0.977 0.65
0065_0109 0.941 0.61
0070_0109 0.870 0.52
0066_0109 0.861 0.51
0018_0109 0.799 0.43
0073_0109 0.771 0.40
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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