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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0104 -0.1 -0.5 -0.8 -0.2 0.1 -0.6 -0.8 -0.5 0.1 0.1 0.6 0.9 0.3 0.3 0.1 1 0.7 -0.8 -0.8 0.3
Select residue pair below:
i_j Score Prob
0063_0104 1.465 0.96
0096_0104 1.111 0.79
0067_0104 0.796 0.43
0048_0104 0.777 0.40
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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