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OPENSEQ.org

Apobec Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0089 0 -0.4 -0.2 -0.2 -0.3 -0.5 0 -0.3 0.5 0.5 0.4 0.4 -0.1 0.4 0.3 0.5 0.1 0 -0.3 -0.4
Select residue pair below:
i_j Score Prob
0089_0141 1.225 0.87
0089_0120 1.016 0.70
0048_0089 0.979 0.66
0042_0089 0.877 0.53
0089_0096 0.807 0.44
0023_0089 0.791 0.42
0075_0089 0.778 0.40
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...

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