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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0048 0.2 -0.5 -0.3 -0.3 -0.4 -0.3 -0.6 0 0.5 1.1 0.1 0.5 0 0.3 0.4 0.1 0.5 0.1 -0.6 -0.4
Select residue pair below:
i_j Score Prob
0040_0048 1.667 0.98
0048_0096 1.070 0.75
0048_0089 0.979 0.66
0045_0048 0.971 0.65
0028_0048 0.843 0.49
0048_0104 0.777 0.40
0048_0066 0.772 0.40
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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