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Apobec Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0006 -0.6 0 0.3 0.5 -0.4 -0.1 -0.7 0.9 -0.4 0.4 0.1 0.2 0.4 0 -0.2 0.2 0 -0.7 -0.7 -0.1
Select residue pair below:
i_j Score Prob
0006_0132 1.250 0.88
0006_0067 0.814 0.45
Local Interactions:
i_j Score Prob
0006_0007 1.014 0.70
0006_0008 0.964 0.64
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...

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