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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0005 -0.3 2.8 -0.3 0 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3
Select residue pair below:
i_j Score Prob
0005_0035 0.885 0.54
0005_0012 0.861 0.51
0005_0009 0.800 0.43
0005_0017 0.793 0.42
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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