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Apobec Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0003 0 -0.3 -0.7 -0.5 -0.3 -0.3 -0.7 -0.6 0.8 0.7 1 0.4 0 0.3 -0.5 -0.3 0.4 0.2 -0.7 -0.6
Select residue pair below:
i_j Score Prob
0003_0010 1.059 0.74
0003_0028 0.879 0.53
0003_0012 0.796 0.43
Local Interactions:
i_j Score Prob
0003_0004 1.021 0.70
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...

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