May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0139] and [Q:0141]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 -0.1 0.3 -0.2 -0.3 -0.1 0 -0.2 0.1 -0.2 0.1 -0.1 -0.1 0 0.3 0.2 0.1 0.1 0 0.7
I 0.5 -0.1 0.1 -0.2 -0.5 0.1 -0.3 0.1 0.4 0.3 0.2 0.2 0.5 0.5 0.2 0.3 -0.3 -0.1 -0.4 -0.4
L 0.1 0 -0.2 1 -0.2 -0.1 -0.1 0.2 0.3 0.1 -0.2 -0.3 -0.6 -0.1 -0.2 0.2 0.5 0.3 0.1 -0.4
V 0.1 -0.4 -0.3 0.3 -0.2 0.1 -0.2 0.1 0 0.1 0.1 -0.1 -0.1 0.2 0.1 0.1 0.1 1 0.3 -0.9
M 0.6 0.3 -0.1 -0.2 0.6 -0.1 0 0.1 -0.2 -0.2 0.1 0.2 -0.2 -0.1 -0.1 -0.2 -0.3 -0.1 0 0.2
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 0 -0.1 0 0 0 0 0 0.3 0.3 0 0 0 0 -0.1 -0.1 -0.1 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0.3 0 0 0 -0.1 -0.1 0.3 -0.1 0 0 0 0 -0.1 -0.1 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.2 0 0.2 -0.1 0.1 -0.1 0 -0.1 0 -0.1 -0.1 0 0 -0.1 0 -0.1 0.3 -0.1 0 0.4
N -0.2 0 -0.1 -0.1 0.4 -0.1 0 -0.1 -0.1 -0.1 -0.2 -0.1 0 -0.1 -0.1 -0.1 0.2 -0.1 0 0.7
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
T 0.1 0.2 0 -0.1 -0.1 0 0 -0.2 -0.1 0.3 -0.1 0.3 0.3 -0.1 -0.1 -0.1 0.2 -0.2 0 -0.1
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0139 -0.6 0.9 1.8 0.9 1.5 0.4 -0.6 -0.1 -0.6 -0.2 -0.6 -0.6 0.2 -0.1 -0.6 -0.3 0.4 -0.6 -0.6 -0.6
0141 1 -0.5 -0.3 0.1 0.6 -0.5 -1.3 -0.9 0.5 0.7 0.6 0 -1 0.1 -0.1 0.4 0.5 0.3 -0.3 0
Select residue pair below:
i_j Score Prob
0025_0139 0.863 0.78
0028_0139 0.827 0.74
0010_0139 0.659 0.48
0139_0156 0.532 0.29
0115_0139 0.510 0.26
Local Interactions:
i_j Score Prob
0139_0141 0.889 0.81
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0125 seconds.