May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DHFR Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [V:0121] and [E:0124]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0.4 -0.1 0 0 0 0 0
F -0.2 0 0 0.3 0 0 0 0 -0.1 -0.2 0 0 0 0 -0.2 -0.1 0.6 0 0 0
I 0.6 0 0.4 0.5 0.2 0.4 -0.1 0.5 -0.2 0.1 0.7 -0.2 -0.4 -0.5 0.6 -0.1 -0.3 -0.3 -0.2 0
L 0.1 -0.3 0.3 -0.5 -0.3 0.1 -0.1 -0.1 -0.1 0.7 -0.1 0.1 0.5 0.2 0.1 0.6 -0.2 0.3 -0.1 -0.2
V 0.6 0.2 -0.7 -0.1 -0.3 -0.3 -0.2 -0.4 0.8 0.8 -0.2 0.2 -0.4 -0.3 1 0.4 0.2 0.1 -0.1 -0.2
M 0.5 0 -0.1 -0.1 0.3 0.2 0 0 -0.1 -0.4 -0.1 -0.1 -0.1 -0.1 0.3 -0.3 0.6 -0.1 0 0
W 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
N -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0.4 0 -0.1 0 -0.1 0 0 0
Q 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
S 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
T -0.3 0 -0.1 0.5 -0.1 -0.1 0 0 0.2 0.4 -0.1 -0.1 0 0 -0.2 0.4 -0.2 -0.1 0 0
G -0.1 0 0 -0.1 0 0 0 0 0 0.2 0 0 0 0 -0.1 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0
C -0.2 0 0 0.9 0.2 0 0 0 -0.1 -0.3 0 0 0 0 -0.2 -0.1 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0121 -0.3 -0.1 2.7 1.8 1.9 0.8 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.3 -0.6 -0.6 0.3 -0.4 -0.6 -0.2
0124 1 -0.5 -0.3 1.6 -0.1 0.3 -1.1 -0.5 0.3 1.2 0 -0.4 -0.4 -0.5 1 1 0.8 -0.4 -1.1 -1
Select residue pair below:
i_j Score Prob
0120_0124 1.233 0.98
0094_0124 1.157 0.96
0121_0124 1.120 0.95
0093_0124 0.557 0.32
Local Interactions:
i_j Score Prob
0123_0124 0.527 0.28
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...

Page generated in 0.0123 seconds.