May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0093] and [A:0097]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.1 0.2 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1
F -0.2 0 0 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.3 -0.1 0.3 -0.3 -0.1 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 -0.1 -0.1 -0.1 0 0 0 0.4 0 0 0 0 0 0 0 0 0 0 0
V -0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M -0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0.2 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0.2 1.1 0.2 0.3 0.4 -0.1 -0.1 0.4 0 -0.3 0.2 -0.1 -0.2 -0.1 -0.2 -0.3 -0.2 -0.3 0.1 -0.2
E -0.4 0.8 -0.5 0.6 0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.1
K -0.3 -0.1 -0.2 0.2 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0
R -0.1 -0.1 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0
H -0.3 -0.1 -0.1 -0.3 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0.2 0 0.8 0.6 0.2 -0.2 0 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 0.2 -0.6 -0.1 0.2
Q -0.4 -0.1 0.3 0.2 0.3 -0.1 0 0 -0.1 0 0 0 0.4 0 0 0 -0.1 -0.1 0 -0.1
S 0.9 -0.8 0.1 0.1 0 0.1 -0.1 -0.3 -0.3 0 -0.4 0.1 -0.3 -0.2 0 0.7 0.5 0.7 -0.2 0.6
T 0.5 0.3 0.1 -0.1 0 0.5 0 -0.1 0.2 0.3 -0.1 0 -0.1 0.4 -0.1 -0.1 -0.3 -0.1 0 -0.2
G 1.3 0 -0.1 0.2 -0.2 -0.1 0 0 -0.1 0 0 -0.1 0.3 0 0 -0.1 -0.1 -0.2 0 -0.1
P 0 -0.1 -0.1 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.2 0 -0.1 -0.1 -0.1 0 0 0 0 0 0.4 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0093 -0.1 -0.8 -0.6 -0.6 -1 -1 -1 -0.6 2.1 0.6 -0.4 -0.7 -0.6 1.3 0.1 2.3 1.1 0.4 -0.6 -0.7
0097 0.8 1 0.8 1.1 0.7 0 -0.7 -0.4 0 -0.3 -0.4 -0.6 -0.4 -0.6 -0.5 -0.4 0 0 -0.7 0
Select residue pair below:
i_j Score Prob
0097_0125 1.877 1.00
0091_0097 1.412 0.99
0052_0097 1.342 0.99
0076_0097 1.084 0.94
0050_0097 0.840 0.75
0093_0097 0.582 0.36
Local Interactions:
i_j Score Prob
0097_0098 1.262 0.98
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.012 seconds.