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Coupling matrix for [H:0088] and [D:0111]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 -0.1 0.3 -0.1 0.3 0 0 -0.5 0.2 -0.7 0.1 0 -0.3 0.2 0.5 -0.3 0.7 -0.4 -0.1
F -0.2 0 0 -0.1 -0.1 0 0 -0.1 0.5 0.1 -0.5 0.9 -0.1 0.1 -0.3 0.1 0.2 -0.3 -0.2 0
I -0.3 -0.2 0.2 -0.1 -0.3 -0.2 0 0.7 0.4 0.1 0.4 0.1 -0.3 1 0.3 -0.2 -0.5 -0.5 -0.3 0.1
L -0.5 0.2 0.2 0 0.6 0.7 -0.1 -0.3 -0.8 -0.3 0.6 0.4 0.7 -0.3 -0.4 -0.2 0.2 0.1 0.1 -0.3
V 0.3 -0.2 -0.3 -0.4 0 -0.1 -0.1 0.4 0.3 0.5 -0.2 -0.9 0.2 0 -0.1 0.5 -0.2 0.6 -0.1 0.3
M -0.1 0 0 0.6 0 0 0 0 -0.2 -0.1 0 -0.2 -0.1 -0.1 -0.2 -0.1 0.3 -0.1 -0.1 0.3
W -0.1 0 0 0 0 0 0 0 0.4 -0.3 0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0
Y 0.2 0 0 -0.1 0.1 -0.1 0 -0.1 -0.1 0.2 -0.4 0.1 -0.1 0.1 0.6 -0.2 0.2 -0.4 -0.1 0
D 0.2 0 0 -0.1 -0.1 0.4 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 -0.2 0.2 -0.1 0.2 0 0
E 0.1 -0.1 0.2 -0.2 -0.1 -0.2 -0.1 -0.1 0.2 0.6 -0.2 0 0.4 0.2 -0.3 0.4 -0.5 -0.1 -0.2 0.3
K -0.3 -0.1 -0.1 0.5 -0.1 -0.1 0 -0.1 -0.3 0 0.6 0.3 -0.2 -0.1 0.2 0 0 0.2 -0.3 -0.1
R 0.1 0 -0.1 0 -0.1 -0.1 0 -0.1 0.1 0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 -0.2 -0.4 0.8 -0.1
H 0.1 -0.1 0 -0.2 0.1 -0.1 0 -0.1 0.7 0.4 0 0 -0.2 0.3 0.5 -0.3 -0.2 -0.6 -0.3 -0.1
N -0.1 0 0 -0.1 0 0 0 0 0.2 0 0.2 -0.2 -0.1 -0.1 0.1 0.1 -0.1 0.2 -0.1 0
Q -0.3 0 0 0 -0.1 -0.1 0 -0.1 0 -0.6 0.4 0.3 0.1 -0.1 0.3 -0.3 0.7 -0.2 -0.1 0.3
S -0.2 0.4 0 -0.2 -0.1 0 0 -0.1 0.3 -0.3 -0.3 -0.3 -0.1 0.5 0.1 -0.2 -0.1 0.8 -0.2 -0.1
T 0.5 0.2 -0.1 0.1 -0.3 -0.2 -0.1 -0.2 -0.3 0.5 0.1 0 -0.2 0.1 -0.1 0.9 0.3 -0.1 0 -0.3
G -0.2 0 0 -0.2 -0.1 0 0 0.7 0.1 0.4 -0.1 -0.2 -0.1 0.1 -0.3 -0.2 -0.2 0 0.1 0
P 0.5 0 0 -0.1 0 0 0 -0.1 -0.2 -0.7 -0.3 -0.3 0.6 -0.2 0.1 0.2 -0.1 0.5 0.2 -0.1
C 0.2 0 0 -0.2 -0.1 -0.1 0 -0.1 0.3 -0.5 0 0.4 -0.1 -0.1 -0.4 -0.3 0.7 -0.5 0.5 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0088 0.4 -0.3 0.8 0.9 1.5 -0.7 -1.2 -0.3 -0.8 0.3 0.3 -0.1 0 -0.6 0 -0.2 1 -0.8 -0.5 -0.1
0111 0.4 -0.6 -0.7 0 -0.4 -0.4 -1 0.1 1.3 0.4 -0.4 0 0.1 0.6 0.4 0.8 -0.1 0.6 0.1 -0.9
Select residue pair below:
i_j Score Prob
0072_0088 1.659 1.00
0050_0088 0.838 0.75
0088_0111 0.638 0.45
Local Interactions:
i_j Score Prob
0086_0088 0.640 0.45
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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