May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0076] and [V:0121]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0.7 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
F 0 0 0.3 0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 -0.1 1 0.5 0.8 -0.3 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 0 -0.1
L -0.3 0.3 0.5 0.5 1.6 -0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0.5 0.1 -0.1 0.4
V 0.3 -0.1 0.7 1.2 -0.5 0.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0 -0.1 -0.1 -0.2
M 0 0 -0.1 -0.2 0.6 0.7 0 0 0 0 0 0 0 0 0 0 -0.2 0 0 -0.1
W 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.3 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 -0.3 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 0 -0.2 -0.3 0 0 0 0 0 0 0 0 0.4 0 0 0 0 0 0
G 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0.4 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0076 0.5 0.1 2.2 3.2 2.4 1 -0.7 -0.5 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.5 -0.5 -0.3 -0.7 -0.7 -0.3
0121 -0.3 -0.1 2.7 1.8 1.9 0.8 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.3 -0.6 -0.6 0.3 -0.4 -0.6 -0.2
Select residue pair below:
i_j Score Prob
0076_0121 2.722 1.00
0121_0124 1.120 0.95
0078_0121 0.792 0.69
0005_0121 0.755 0.63
0056_0121 0.543 0.30
Local Interactions:
i_j Score Prob
0120_0121 0.971 0.88
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0152 seconds.