May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [M:0038] and [F:0135]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0.3 0.7 0 -0.1 -0.2 0 -0.2 0 0.5 -0.6 0 0 0 -0.1 0 0 0
F 0 -0.1 0.6 -0.1 -0.1 0 0 -0.3 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0
I -0.1 0.1 0.1 0 -0.4 -0.1 -0.3 0.6 -0.2 0.5 0 -0.1 0.9 0 -0.1 -0.1 -0.1 0 0 -0.1
L -0.3 1 -0.7 -0.6 -0.5 -0.2 0.9 0.7 0.1 0.6 -0.1 -0.4 0.5 -0.1 0.3 -0.4 -0.3 -0.1 -0.1 0.5
V -0.1 -0.3 0.3 0.8 0.2 0 0 0 0.5 0.3 -0.1 -0.2 0.2 -0.1 -0.1 -0.2 -0.3 -0.1 -0.1 -0.1
M -0.1 0.7 -0.3 -0.7 -0.1 -0.1 -0.2 0.7 -0.1 0.1 0 -0.1 0.5 0 -0.1 -0.1 -0.1 0 0 -0.1
W 0 0 -0.1 -0.1 -0.1 0 0 -0.2 0 0 0 0 -0.1 0 0 0 0 0 0 0
Y 0 -0.2 0.3 -0.1 1.1 0 -0.1 -0.6 -0.1 -0.2 0 0.3 -0.2 0 0 -0.1 0 0 0 0
D 0 0 -0.1 -0.1 -0.1 0 0 -0.2 0 0 0 0 -0.1 0 0 0 0 0 0 0
E 0 -0.3 0.1 0.2 -0.3 0.4 -0.1 -1.1 -0.2 -0.1 0 0.2 0.9 0 0.3 0.8 0.3 0 0 -0.1
K -0.1 0.5 -0.7 -0.6 -0.6 -0.1 -0.2 1.1 -0.1 0.9 0 -0.1 0 0 -0.1 -0.1 0.3 0 0 -0.1
R 0.4 0.3 -0.4 0.2 0.8 -0.1 -0.2 -0.1 -0.1 -0.3 0 0.3 -0.6 0 0 0 -0.1 0 0 0
H 0 -0.1 0.1 0 -0.5 0 0.7 0.4 0 -0.2 0 -0.1 -0.1 0 0 0 0 0 0 0
N 0 -0.2 -0.1 0.1 -0.2 0 0 0.3 0 -0.1 0 0 0.2 0 0 0 0 0 0 0
Q 0 0 0.3 0.3 -0.4 0.1 -0.2 0.4 -0.1 -0.3 0 0.2 -0.2 0 -0.1 0.3 -0.1 0 0 0
S 0 -0.2 0.1 0.5 0.7 0 -0.1 -0.2 0 -0.4 0 0 -0.3 0 0 0 0 0 0 0
T 0.2 -0.5 1 0.3 0.6 0 0 0.2 0.1 -0.8 -0.1 -0.3 0 -0.1 -0.2 -0.3 0.4 -0.1 -0.1 -0.2
G 0 -0.1 -0.1 -0.1 -0.1 0 0 0.2 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0
P 0 0 -0.1 -0.1 -0.1 0 0 -0.2 0 0 0 0 -0.1 0 0 0 0 0 0 0
C 0 -0.2 0.1 0.4 0 0 0 -0.5 0 0.5 0 0 -0.2 0 0 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0038 0.4 -0.8 1.1 1.7 1.4 0.1 -1.1 0 -1.1 1.6 0.3 0.4 0 -0.4 0.2 -0.4 0.4 -0.9 -1.1 -0.5
0135 -0.5 0.7 1 1.1 1.4 -0.3 0.3 1.8 -0.3 0 -0.9 0 1.2 -0.9 -0.3 -0.7 -0.3 -0.9 -0.9 -0.7
Select residue pair below:
i_j Score Prob
0034_0135 1.919 1.00
0006_0135 1.897 1.00
0038_0135 1.390 0.99
0135_0182 1.224 0.97
0114_0135 1.178 0.96
0135_0180 1.004 0.90
Local Interactions:
i_j Score Prob
0133_0135 1.372 0.99
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0145 seconds.