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Coupling matrix for [Y:0034] and [Y:0178]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.5 -0.1 0.2 -0.1 0 0.5 0 0 0.3 0 0 -0.1 0 0 -0.1 0 0 0 0.1
F 0.5 0.1 0.5 0.3 0 0.2 0.1 0.2 -0.3 0.3 -0.3 -0.1 1 -0.2 -0.1 -0.3 -0.3 -0.2 -0.1 -0.3
I 0 0.3 0.2 -0.1 -0.1 0.2 -0.2 0.1 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
L -0.1 0.6 0.2 0.1 -0.2 -0.1 -0.3 0.7 -0.1 0 0 0 -0.3 0 0 -0.2 -0.1 -0.1 0 -0.2
V 0 -0.2 0 0 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0
M 0 -0.4 -0.1 -0.1 -0.1 0 -0.1 0.5 0 0 0 0 -0.2 0 0 0.3 0 0 0 0
W -0.1 0.2 -0.1 0.1 0.5 0.1 -0.1 0.2 0 0 0 0 -0.3 0 0 -0.1 -0.1 -0.1 0 -0.1
Y 0.2 -0.3 0.2 0.6 0.2 -0.4 -0.4 0.1 -0.1 -0.2 0.2 -0.1 0.7 0.2 -0.1 -0.2 -0.3 -0.2 -0.1 -0.1
D 0 0.2 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0.2 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 -0.1 -0.1 0.7 0 -0.1 -0.1 0.2 0 0 0 0.1 0 0 0 0 0 0 -0.1
R -0.1 0.4 -0.1 -0.7 -0.1 0.1 -0.2 0.2 -0.1 -0.1 0.3 0 -1.1 -0.1 0 0.5 1.4 0.2 0 -0.1
H -0.3 0.3 -0.3 0.4 -0.1 0.2 0 0.2 0.2 -0.2 -0.1 -0.1 -0.2 0.2 0.1 -0.3 -0.5 0.2 0.1 0.7
N -0.1 -0.1 0 -0.4 -0.2 -0.1 0.5 -0.2 0.1 0.1 0 0 0.2 0 0 0.3 -0.1 -0.1 0 0
Q 0 0.3 -0.1 0.2 -0.1 -0.1 -0.2 -0.4 0 0 0 0 0.2 0 0 0 0 0 0 -0.1
S 0 -0.1 -0.1 -0.1 -0.1 0 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.3
T 0 -0.3 0 0 -0.1 0 0.4 -0.3 0 0 0 0 0 0 0 0.4 0 0 0 0.1
G 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0034 0.3 1.3 0.1 0.5 -0.4 0.1 0.2 0.5 -0.6 -0.5 -0.2 0.4 0.9 0.1 0.2 -0.1 -0.2 -0.7 -0.7 -0.6
0178 -0.2 1.1 0.2 0.4 0.5 -0.1 0.3 0.8 -0.3 -0.1 -0.3 -0.6 -0.5 -0.2 -0.4 0 -0.2 -0.4 -0.4 0.2
Select residue pair below:
i_j Score Prob
0034_0038 2.590 1.00
0034_0182 2.266 1.00
0034_0135 1.919 1.00
0034_0114 1.188 0.97
0031_0034 1.090 0.94
0034_0180 1.003 0.90
0034_0178 0.619 0.42
0034_0161 0.545 0.31
0030_0034 0.507 0.26
Local Interactions:
i_j Score Prob
0032_0034 0.511 0.26
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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