May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0034] and [M:0038]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.3 0.6 -0.3 -0.1 0 0 0 0.7 -0.1 -0.1 0.4 0 -0.1 0 -0.2 0 0 0
F 0.6 -0.3 -0.2 -0.8 0.3 0.6 -0.1 -0.3 -0.1 -0.3 0.2 -0.5 -0.4 -0.1 1.3 -0.3 1.2 0.3 -0.1 -0.4
I -0.1 0 -0.3 -0.1 0.2 -0.2 0 -0.1 0 0.1 0.2 0.9 -0.1 0 -0.1 -0.1 -0.3 0 0 0
L 0.1 -0.1 -0.1 0.3 -0.4 0 0 -0.2 0 1.3 -0.1 0.2 0.2 -0.1 -0.3 0.2 -0.7 0 0 -0.1
V 0 0 0.3 -0.1 -0.1 -0.1 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0
M -0.1 0 -0.4 -0.4 0 0.5 0 0.3 0 0.6 -0.2 -0.1 -0.1 0.4 -0.1 -0.1 -0.2 0 0 0
W -0.2 0 -0.1 -0.1 -0.2 -0.6 0 0.2 0 -0.2 0.4 -0.2 0.6 0.9 0.1 0.1 -0.2 -0.1 0 -0.1
Y 0.2 -0.1 -0.3 -0.5 1 0.6 -0.1 -0.3 -0.1 -1 0.6 0 -0.1 -0.4 0.6 -0.4 0.8 -0.2 -0.1 -0.1
D 0 0 -0.1 -0.2 -0.1 0 0 0 0 -0.1 0.4 0 0 0 0 0 -0.1 0 0 0
E 0 0 -0.1 -0.2 -0.1 -0.1 0 0 0 -0.1 0.4 0 0 0 0 0 -0.1 0 0 0
K -0.1 0 0.5 -0.2 -0.2 0.2 0 -0.1 0 0 -0.1 -0.2 0 0 -0.1 0 0.1 0 0 0
R -0.3 0.4 1.3 2 0.3 -0.2 0 0.2 0 -0.7 -0.5 -0.5 -0.4 -0.1 -0.4 -0.1 -0.3 -0.1 0 -0.1
H 0.2 -0.1 -0.1 0.3 0.6 -0.1 -0.1 0.2 -0.1 -0.4 -0.1 -1.1 0.1 -0.5 -0.3 0.6 1.2 -0.2 -0.1 0.6
N 0.1 0 0.4 0.5 0 -0.3 0 -0.2 0 0.6 -0.4 0.1 -0.1 -0.1 -0.2 0 -0.3 0 0 0
Q -0.1 0 -0.1 0.6 0 -0.2 0 0.2 0 -0.5 -0.3 1.3 -0.1 0 -0.2 -0.1 -0.3 0 0 0
S 0 0 0.2 -0.3 -0.2 0.1 0 0 0 0.3 -0.1 0.3 0 0 -0.1 0 -0.2 0 0 0
T -0.1 0 -0.1 -0.2 -0.2 -0.1 0 0 0 0.5 0 0.3 0 0 0 0 -0.1 0 0 0
G 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 -0.1 -0.1 0 0 0 0 0 0.1 0 0 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0034 0.3 1.3 0.1 0.5 -0.4 0.1 0.2 0.5 -0.6 -0.5 -0.2 0.4 0.9 0.1 0.2 -0.1 -0.2 -0.7 -0.7 -0.6
0038 0.4 -0.8 1.1 1.7 1.4 0.1 -1.1 0 -1.1 1.6 0.3 0.4 0 -0.4 0.2 -0.4 0.4 -0.9 -1.1 -0.5
Select residue pair below:
i_j Score Prob
0034_0038 2.590 1.00
0038_0135 1.390 0.99
0008_0038 0.891 0.81
0038_0114 0.876 0.79
Local Interactions:
i_j Score Prob
0037_0038 0.867 0.78
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0126 seconds.