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Coupling matrix for [N:0030] and [Q:0171]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.1 -0.3 -0.5 0.3 -0.1 -0.5 -0.4 -0.1 0.1 -0.4 0.8 0.7 -0.3 0.7 -0.3 0 0.8 -0.4 0.3
F 0 -0.1 -0.1 -0.1 -0.1 0 0 0.4 0 0 0 0 -0.1 0 -0.1 0 0 -0.1 0 0
I -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 -0.1 -0.1 0.3 -0.1 -0.2 0 0.2 0.3 -0.1 -0.2 0.4 0
L -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0 1.2 -0.2 -0.1 -0.1 -0.1 0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0 0
V 0.3 -0.2 -0.2 0.1 0.2 -0.1 0 0.8 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.3 -0.1 -0.1 -0.2 0 0
M 0 -0.1 -0.1 -0.1 0.4 0 0 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.4 0 -0.1 -0.1 -0.1 0 0
W 0 -0.1 0 0 0 0 0 -0.1 0 0 0.4 0 -0.1 0 -0.1 0 0 -0.1 0 0
Y 0 -0.1 -0.1 -0.1 -0.1 0 0 0.4 0 0 0 0 -0.1 0 -0.1 0 0 -0.1 0 0
D -0.1 -0.7 -0.5 -0.3 -0.4 -0.3 -0.1 -0.4 1.2 -0.2 0.4 -0.2 0.6 0.1 0 -0.3 -0.1 0.6 -0.2 0.4
E 0.4 -0.4 -0.4 0.6 -0.9 -0.2 0.3 -0.6 0.5 0.1 1.2 0.8 -0.2 0.2 -0.6 0.7 0.2 -0.3 -0.5 -0.5
K 0.1 0.4 0.3 -0.1 0.7 0.3 -0.1 -0.1 0.3 0.3 -0.6 -0.1 0.2 -0.3 0.6 -0.1 -0.1 -0.6 -0.2 -0.1
R 0.2 0.7 -0.4 0.2 -0.3 0.2 0.4 0 -0.2 0.7 -0.2 -0.3 0.1 -0.2 -0.1 -0.3 -0.1 -0.3 0.3 -0.1
H 0 0.3 0.4 -0.1 -0.1 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 -0.1 0 -0.1 0 0
N -0.3 0.2 -0.2 -0.5 -0.4 -0.2 -0.1 -0.1 0.1 -0.1 -0.3 -0.1 -0.5 0.8 0.6 0.1 0 1.6 -0.1 -0.1
Q 0.1 0.2 0.9 -0.2 -0.1 -0.2 -0.1 -0.3 -0.4 0.4 -0.3 -0.3 0.1 -0.2 0.1 0.5 -0.3 -0.4 0.7 -0.1
S 0.3 -0.1 0.2 0.5 0.1 0.4 0.1 -0.2 -0.2 -0.5 0.2 -0.2 -0.2 0.2 0.2 -0.4 0.1 0.1 -0.2 -0.1
T -0.3 0.5 1 0.1 0.5 -0.1 -0.1 -0.3 -0.5 -0.3 0.3 -0.5 -0.1 -0.2 -0.3 0.1 0.2 0.1 -0.1 -0.1
G -0.6 0.1 0.1 -0.2 0.5 0.4 -0.2 -0.1 0.3 0.2 -0.6 0.9 0.2 -0.5 -0.3 0.1 0.6 -0.5 -0.2 -0.2
P -0.1 -0.2 -0.1 0.6 0.2 -0.1 0 0.6 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.4 0.2 -0.1 -0.2 0 0
C 0 -0.1 -0.1 0.4 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 -0.1 0 0.2 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0030 1.4 -1 -0.2 -0.4 -0.3 -0.8 -0.9 -1 0.3 1.5 0.9 0.6 -0.8 0.7 0.3 0.9 0.1 0.7 -0.6 -0.8
0171 -0.2 0.6 0.4 0.3 0.4 -0.6 -1.2 0.7 0.3 -0.1 -0.3 0.3 0.5 -0.6 0.3 0.2 -0.2 0.4 -1.1 -1.3
Select residue pair below:
i_j Score Prob
0030_0178 1.292 0.98
0030_0171 0.739 0.61
0030_0034 0.507 0.26
0030_0173 0.507 0.26
Local Interactions:
i_j Score Prob
0030_0031 1.103 0.94
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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