May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0021] and [L:0023]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 -0.1 -0.4 0 0.3 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.4 0
F 0 0 -0.2 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0.3 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 0 -0.1 -0.5 -0.1 0 0 0 0 0 0 0 0 0 0.7 0 0 0 0 0
M 0 0 -0.2 0.4 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.1 0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0.2 -0.3 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0.3 -0.5 0.3 0.3 0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 0
E 0 -0.1 0.2 0.2 0 -0.4 0 0 0 0 0 0 0 0 0.2 0 0 0 0 0
K 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0
R 0 0 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0
H 0.4 0 -0.2 -0.2 -0.1 0.3 0 0 0 0 0 0 0 0 0.2 0 0 0 0 0
N -0.1 -0.1 0.5 1.3 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 -0.4 0 0.2 -0.1 -0.1 -0.1
Q 0 0 0.6 -0.2 -0.1 0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0
S 0 0 -0.6 0.1 -0.1 0.3 0 0 0 0 0 0 0 0.3 -0.1 0 0.4 0 -0.1 0
T 0 0 0.1 -0.1 0 0.3 0 0 0 0 0 0 0 0 0.1 0 0 0 0 0
G -0.2 0 0.3 0.8 0.5 0.2 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.2 0.4 -0.1 -0.2 0 -0.1 0.1
P 0 0 0.3 -0.3 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 -0.1 -0.2 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0021 0 -0.4 -0.7 -0.4 -0.2 -0.4 -0.6 -0.3 0.6 0.1 0.2 -0.2 0.4 0.8 0.4 0.3 0.4 1.4 -0.6 -0.4
0023 -0.2 0 1 0.9 0.3 0.7 -0.5 -0.5 -0.5 -0.1 -0.5 -0.5 -0.5 -0.2 0.9 -0.5 0.2 -0.3 -0.1 -0.1
Select residue pair below:
i_j Score Prob
0023_0032 1.196 0.97
0018_0023 0.919 0.83
0023_0028 0.558 0.32
Local Interactions:
i_j Score Prob
0023_0024 0.770 0.66
0021_0023 0.637 0.45
0023_0025 0.545 0.31
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.1844 seconds.