May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0016] and [I:0017]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.4 0.7 -0.6 -0.1 0.1 0 -0.1 0 0.3 0.3 0 0 0 0 0 -0.1 -0.1 0 0
F 0 0 -0.2 -0.1 0 0 0 0 0 0.4 0 0 0 0 0 0 0 0 0 0
I 0 -0.1 -0.2 0.8 -0.1 -0.2 0 0.3 0 -0.1 0 0 0 0 0 0 -0.1 0.3 0 0
L 0 -0.1 0.3 0.1 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 -0.2 0.6 0.8 -0.1 0.7 0 -0.1 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 0
M 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.3 -0.1 0 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 -0.7 0.7 0.2 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.3 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0.3 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0.1 -0.3 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 0.7 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 0.4 0.9 0.3 0 -0.3 -0.1 0.2 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1
P 0 0 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0016 0.8 -0.3 0.9 -0.4 1.4 -0.7 -0.3 -0.3 -0.7 0.2 -0.3 -0.7 -0.2 0 -0.2 0.1 -0.1 1.5 -0.7 -0.2
0017 -0.5 0.2 1.4 1.9 0.5 0.5 -0.5 0 -0.5 0.2 -0.1 -0.5 -0.5 -0.5 -0.5 -0.5 0 -0.2 -0.5 -0.5
Select residue pair below:
i_j Score Prob
0017_0024 0.978 0.88
0009_0017 0.931 0.85
Local Interactions:
i_j Score Prob
0017_0018 1.147 0.96
0016_0017 0.595 0.38
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0129 seconds.