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Coupling matrix for [S:0012] and [Q:0141]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 0.1 -0.2 0.3 -0.2 0.2 -0.1 -0.4 0 0.5 0 0.1 0.6 -0.2 0.1 -0.4 -0.7 0.3 -0.1 -0.5
F -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.1 0.3 0.3 0 -0.1 0 -0.1 -0.1 -0.1 0 0
I 0 0 -0.1 -0.1 -0.1 0 0 0 0.1 -0.2 -0.3 -0.1 0 0.7 0.8 -0.1 -0.2 -0.1 -0.1 -0.1
L -0.4 0 -0.1 -0.1 0.4 0 0 0 -0.3 -0.3 -0.3 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 -0.2 0.7 0.4
V -0.2 0 0 0.3 0.3 0 0 0 -0.1 -0.1 -0.2 0 0 -0.1 -0.1 -0.1 -0.1 0.5 -0.1 0
M -0.3 0 0.3 -0.1 -0.2 0 0 0 0.1 0.3 0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.2 0.7 -0.1
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0.1 0 -0.1 0.2 0.1 0 0 0 -0.1 -0.2 -0.2 -0.1 0 -0.1 -0.1 0.3 -0.2 0.1 -0.1 0.3
D 0.2 0.1 -0.5 0.6 -0.6 0.3 -0.2 0.6 -0.4 -0.1 -0.4 0.4 1.1 0 0 -0.2 0.6 0.6 -0.6 -0.4
E 0 -0.1 -0.1 -0.2 -0.1 -0.1 0 -0.1 -0.2 0.7 0.7 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 0.3 0 -0.1
K 0 0 -0.1 -0.1 -0.1 -0.1 0 0.3 0 0.4 -0.4 -0.2 -0.1 0.5 -0.1 -0.1 -0.2 -0.3 -0.1 -0.1
R -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.1 0.6 -0.3 -0.1 -0.3 -0.1 0.2 -0.2 -0.2 0.2 0.5 -0.1 -0.1
H -0.1 0 0 0 -0.1 0 0 0 -0.1 0.3 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.5 0 0
N 0.5 0 -0.1 0.2 -0.2 -0.1 0 -0.1 0 -0.3 0.6 -0.1 -0.1 0.2 -0.1 0.5 -0.3 -0.2 -0.1 -0.1
Q 0.2 0 0 0 -0.1 0 0 0 0.3 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 -0.1 0
S 0.4 -0.3 0.8 -0.2 0.8 -0.3 -0.1 0.1 0.1 0.5 0 -0.1 -0.5 -0.1 0.4 -0.2 0.5 -0.6 -0.3 -0.1
T -0.2 -0.3 0.6 -0.5 0.2 0.5 -0.1 -0.4 -0.2 -0.2 -0.3 0.3 -0.5 -0.4 -0.3 1.1 0.9 -0.2 -0.3 0.8
G 0.3 0.7 -0.3 0.2 0.2 -0.2 0 -0.1 0.5 -0.1 0 0.4 -0.3 0 -0.3 0.2 -0.3 0.2 -0.1 -0.2
P 0.1 0 0 -0.1 -0.1 0 0 0 -0.1 0 0 -0.2 0 -0.2 -0.1 -0.1 0.1 -0.1 -0.1 0
C -0.1 0 -0.1 -0.1 0.2 -0.1 0 -0.1 -0.3 -0.4 0.8 -0.3 -0.1 0.1 0.8 0.1 -0.3 -0.4 -0.1 0.7
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 0.4 -0.4 -0.1 -0.2 -0.3 -0.3 -0.8 -0.6 1.3 -0.1 -0.1 -0.1 -0.6 0.1 -0.6 0.7 0.9 0.9 -0.2 -0.3
0141 1 -0.5 -0.3 0.1 0.6 -0.5 -1.3 -0.9 0.5 0.7 0.6 0 -1 0.1 -0.1 0.4 0.5 0.3 -0.3 0
Select residue pair below:
i_j Score Prob
0012_0016 2.224 1.00
0012_0143 1.333 0.99
0012_0141 0.908 0.82
0012_0029 0.718 0.58
0012_0145 0.693 0.54
0012_0024 0.655 0.47
Local Interactions:
i_j Score Prob
0012_0014 1.667 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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