May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0012] and [G:0016]
- A F I L V M W Y D E K R H N Q S T G P C
A 1 0.2 0.1 0.1 1.1 0 -0.2 -0.2 0 -0.4 -0.1 0 -0.2 -0.1 -0.2 -0.1 0.2 -0.9 0 -0.1
F -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0
I -0.2 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0.4 0 0 0 0.2 0 0
L -0.3 0 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0.7 0 0
V -0.2 0 -0.1 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0
M -0.2 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0.4 0 0
W -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0
Y -0.2 0 -0.1 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.3 0 0
D 0.6 0.1 -0.9 1.4 -0.7 -0.2 0.7 -0.2 -0.2 -1.1 0.1 -0.2 0.8 0.5 0.4 -0.2 0 0.4 -0.2 -0.3
E 0.5 0 -0.2 -0.1 0.2 0 0 0.4 0 -0.1 0 0 0 0 0 0 -0.1 -0.5 0 0
K 0.3 0 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0
R 0.1 0 0.6 -0.1 -0.5 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0.2 0 -0.1
H 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 0.3 -0.3 0 0 -0.1 0.3 0 0 0 0 -0.1 -0.1 -0.1 0.4 -0.2 0.1 0 -0.1
Q -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0
S 0 -0.1 0.8 -0.7 0.9 0 -0.1 0.1 0 -0.3 0 0 -0.2 -0.1 -0.1 -0.1 -0.2 -0.3 0 1
T -0.2 -0.1 0.5 0.3 0.8 0 -0.2 -0.2 0 -0.2 -0.1 0 -0.2 -0.2 -0.1 -0.1 0.8 0 0 -0.3
G -0.1 -0.1 -0.1 0.2 -0.5 0 -0.1 -0.1 0 2.4 0 0 -0.1 -0.1 0.3 0.5 -0.3 -1.3 0 -0.2
P 0.6 0 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0
C -0.4 0 -0.1 -0.1 -0.3 0 0 0 0 -0.1 0 0 0 -0.1 0 0 -0.1 1.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 0.4 -0.4 -0.1 -0.2 -0.3 -0.3 -0.8 -0.6 1.3 -0.1 -0.1 -0.1 -0.6 0.1 -0.6 0.7 0.9 0.9 -0.2 -0.3
0016 0.8 -0.3 0.9 -0.4 1.4 -0.7 -0.3 -0.3 -0.7 0.2 -0.3 -0.7 -0.2 0 -0.2 0.1 -0.1 1.5 -0.7 -0.2
Select residue pair below:
i_j Score Prob
0016_0145 4.225 1.00
0012_0016 2.224 1.00
0016_0148 1.761 1.00
0016_0024 0.718 0.58
Local Interactions:
i_j Score Prob
0014_0016 0.797 0.70
0016_0017 0.595 0.38
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0177 seconds.