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Coupling matrix for [V:0011] and [R:0138]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 -0.5 0.6 0.3 -0.2 -0.1 -0.6 -0.2 0 0 1.3 -0.2 0.6 -0.6 0.4 0.1 0 0 -0.1
F -0.1 -0.1 0 0.1 0.1 0 0 -0.1 -0.1 -0.1 0 -0.2 0.4 -0.1 0.2 -0.1 -0.1 0 0 0
I -0.1 0.1 0.7 -0.5 -0.2 0.1 -0.1 0.2 -0.3 -0.3 -0.6 0.1 1.2 0.1 0.2 -0.2 0.1 0 0 -0.1
L 0.2 -0.2 0 0.1 -0.1 -0.1 -0.1 0.3 -0.4 0.1 0.5 -0.1 0.2 0.6 0 -0.2 -0.3 0 0 -0.1
V 0.5 -0.2 -0.2 -0.7 0 0.2 0.2 0.3 -0.2 0.2 0.4 -0.3 0.7 -0.4 0 -0.1 0.1 -0.1 -0.1 0.1
M -0.2 0.5 0 -0.5 0.3 -0.1 -0.1 0.4 -0.4 -0.4 -0.1 -0.1 0 -0.3 0.4 0.4 0.1 0 0 0.2
W 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0
Y 0 0.3 -0.1 0.1 0.2 0 0 -0.1 -0.1 0.8 -0.1 -0.5 0.2 -0.1 -0.2 -0.1 -0.1 0 0 0
D 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0
E 0 -0.6 0.6 -0.2 0.3 -0.4 -0.2 -0.3 -0.4 -0.1 1.3 0 -0.5 0.1 0.5 0.1 0 -0.1 -0.1 -0.1
K 0 0 -0.1 0 -0.1 0 0 0 0 0.3 -0.1 0 -0.1 0 0 0 0 0 0 0
R -0.1 -0.1 0.4 -0.3 -0.3 0 0 -0.3 0.4 1.4 0 -0.8 -0.3 -0.1 -0.2 -0.1 0.4 0 0 0
H 0 0 -0.1 0.3 -0.1 0 0 -0.1 0 0 -0.2 0 -0.1 0.4 -0.1 0 -0.1 0 0 0
N 0 0 -0.1 -0.1 -0.1 0 0 0 0 -0.3 0.2 0.7 -0.1 -0.1 -0.1 0 -0.1 0 0 0
Q -0.1 0.2 0.1 0.6 0.5 0.4 0.1 0.1 0.9 -0.5 -0.4 -1 -0.4 -0.5 0.8 -0.1 0.1 -0.1 -0.1 -0.2
S -0.1 0.4 -0.3 -0.2 0.1 -0.1 0 0.4 0.3 0 -0.4 0.2 -0.1 -0.1 -0.2 -0.1 0.1 0 0 0.2
T -0.1 -0.2 0.1 0.6 -0.1 -0.1 0 -0.3 0.3 0.2 0.5 0.2 0 -0.2 -0.3 -0.2 -0.1 0 0 0
G 0 0 -0.1 -0.1 -0.1 0 0 0 0.2 0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.3 -0.1 0 0 0
P 0 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 0.2 0 0 0 0 0 0 0 0
C -0.1 0.2 0.5 0.2 0.3 -0.1 0 0.4 -0.2 -0.6 -0.4 0.3 0 -0.2 0 -0.2 -0.2 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 0.6 0 0.5 0.5 0.6 0.2 -0.8 -0.1 -0.8 -0.3 -0.5 -0.4 -0.4 -0.5 0.3 0.3 0.4 -0.4 -0.7 0.4
0138 -0.7 0.1 1 0.5 0.9 -0.4 -0.9 -0.1 0.2 1.1 0.4 0.5 0.1 -0.1 0.6 0.1 0.7 -1.1 -1.1 -0.8
Select residue pair below:
i_j Score Prob
0138_0181 2.113 1.00
0011_0138 1.253 0.98
0138_0183 0.848 0.76
0138_0162 0.565 0.33
0015_0138 0.541 0.30
0138_0151 0.507 0.26
0138_0159 0.502 0.25
Local Interactions:
i_j Score Prob
0136_0138 0.831 0.74
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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