May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0011] and [L:0134]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 0 0.4 -0.3 0.4 -0.7 -0.1 -0.1 0 0 0 0 -0.1 0 -0.1 0 -0.3 -0.1 0.4 0.4
F -0.2 -0.1 0.1 -0.3 0 0.3 0 -0.1 0 0 0 0 0.4 0 0 0 0 0 0 0
I -0.7 0.2 0 0.2 -0.1 0.7 0.3 -0.1 0 0 0 0 -0.2 0 -0.1 0 0.4 -0.1 -0.1 0
L -0.4 -0.2 -0.4 0.4 -0.4 0.5 1 -0.1 0 0 0 0 0.3 0 -0.1 0 -0.1 0 0 -0.1
V 0.7 0.1 -0.2 -0.2 -0.2 0.1 0.4 0.4 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 0.1 -0.1 -0.2 0.3 -0.2 -0.1
M -0.3 0.4 0.2 0.6 -0.3 -0.1 0.1 0.3 0 0 0 0 -0.1 0 -0.1 0 -0.1 -0.1 -0.1 -0.2
W 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.3 -0.1 0.1 0.3 0 0.5 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
D 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0.3 -0.1 0 0.6 0 -0.2 -0.1 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 -0.3
K -0.1 0 -0.1 -0.1 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 -0.3 -0.2 0.4 0.1 0.4 -0.3 -0.1 0 0 0 0 0.2 0 -0.1 0 0 0 0 -0.1
H -0.1 0.4 -0.4 0.4 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 0.2 -0.3 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.2 -0.2 0.6 0.1 0.6 -0.3 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.5
S 0.4 -0.1 0.5 -0.1 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.2 -0.1 0.7 0.2 0.3 -0.1 -0.1 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
G -0.1 0 -0.1 -0.1 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0.1 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.9 0.5 -0.6 0 -0.2 -0.2 -0.2 0 0 0 0 0 -0.1 0 -0.1 0 0 0 0 0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 0.6 0 0.5 0.5 0.6 0.2 -0.8 -0.1 -0.8 -0.3 -0.5 -0.4 -0.4 -0.5 0.3 0.3 0.4 -0.4 -0.7 0.4
0134 0.1 0.3 2.8 2.4 1.8 0.7 0.2 -0.3 -0.8 -0.8 -0.8 -0.8 -0.3 -0.8 -0.6 -0.8 -0.5 -0.5 -0.6 0
Select residue pair below:
i_j Score Prob
0134_0152 1.840 1.00
0009_0134 0.741 0.61
0131_0134 0.607 0.40
0007_0134 0.595 0.38
0011_0134 0.529 0.28
Local Interactions:
i_j Score Prob
0134_0136 2.227 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0178 seconds.