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Coupling matrix for [V:0011] and [G:0021]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.6 -0.1 0 -0.1 -0.1 0.2 -0.1 -0.1 -0.5 0.1 -0.2 -0.1 -0.2 0.1 0.1 0.6 0.3 0.1 -0.1 -0.1
F 0 0 0 0 0 0.4 0 0 -0.1 0 0 0 0 0.4 -0.1 0 -0.1 -0.3 0 0
I 0.1 0.2 0 -0.1 0.1 -0.1 -0.1 -0.1 0.1 -0.2 0.6 -0.1 0.2 -0.1 -0.4 0.3 0.1 -0.3 0.3 -0.1
L -0.1 0 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 0.6 0.1 -0.1 -0.1 0.3 0 0
V -0.3 0.2 -0.1 -0.1 0.5 0.1 -0.1 0.3 0.2 0.2 -0.3 -0.2 0.2 0.4 -0.5 -0.1 -0.5 0.7 0 -0.1
M -0.1 -0.1 0 -0.1 -0.2 -0.1 0.3 0 0.6 -0.1 -0.1 -0.1 0.5 0.6 -0.4 0.1 -0.2 -0.2 -0.1 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.2 0 0
Y 0 0 0 0 0 0 0 0 0.2 0 -0.1 0 0 -0.1 0.4 0 -0.1 -0.1 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 0 0
E 0.1 0 0 0.2 -0.1 -0.1 0 -0.1 0.4 -0.1 -0.1 -0.1 0.3 -0.7 0.1 -0.1 -0.3 0.7 -0.1 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.4 0 0 -0.4 0 0
R -0.1 0 0 0 -0.1 0 0 0 -0.1 0 0.1 -0.1 -0.1 0.4 -0.2 -0.1 -0.1 0.2 -0.1 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0.3 -0.1 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0 0 0 0.3 0 0
Q 0 -0.1 -0.1 -0.2 0 -0.2 -0.1 0.1 0.1 0.4 0.4 0.2 -0.1 -0.2 0.6 0.2 -0.2 0 -0.2 -0.1
S 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0.4 -0.1 0 0.7 -0.2 0 0
T -0.1 0 0 0 -0.1 -0.1 0 0 0.2 -0.1 -0.1 0 -0.1 0.2 -0.2 -0.1 -0.1 0.4 0.2 0.4
G 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.3 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0 0 -0.1 0 0
C 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.4 -0.1 0.1 -0.1 -0.1 -0.1 0.5 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 0.6 0 0.5 0.5 0.6 0.2 -0.8 -0.1 -0.8 -0.3 -0.5 -0.4 -0.4 -0.5 0.3 0.3 0.4 -0.4 -0.7 0.4
0021 0 -0.4 -0.7 -0.4 -0.2 -0.4 -0.6 -0.3 0.6 0.1 0.2 -0.2 0.4 0.8 0.4 0.3 0.4 1.4 -0.6 -0.4
Select residue pair below:
i_j Score Prob
0011_0015 1.760 1.00
0011_0138 1.253 0.98
0011_0149 1.109 0.95
0011_0136 0.947 0.86
0011_0152 0.623 0.42
0011_0134 0.529 0.28
0011_0021 0.506 0.25
Local Interactions:
i_j Score Prob
0009_0011 2.270 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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