May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0007] and [A:0125]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.3 -0.4 0.4 -0.3 0.6 0.3 -0.2 0.2 -0.1 0 0 -0.1 -0.1 0 -0.3 0.8 -0.5 0 -0.2
F 0.3 0.2 -0.1 0.8 -0.4 0.3 -0.1 -0.2 0 0 0 0 0 0 0 -0.3 0.2 -0.2 0 -0.4
I 0.7 0 0.1 -0.3 0.2 0 -0.1 -0.4 -0.1 0.2 0 0 -0.1 -0.1 0 0.6 -0.3 0.1 0 0.2
L 0.6 0.1 0.2 -0.1 -0.1 0.3 -0.3 0.7 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.4 0.1 -0.1 -0.4
V 1.1 -0.7 -0.1 -0.4 0.1 -0.5 -0.1 0 0 -0.1 0 0 0 0.4 0 0.7 0.6 -0.3 0 -0.2
M -0.2 0.3 -0.2 0.5 -0.2 0 0.2 0.5 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.9 -1 1.1 -0.1 0.4
W -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.5 0.2 0 0.9 0.2 -0.3 0 0.1 0 0 0 0 0 0 0 -0.1 -0.4 -0.1 0 -0.1
D -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.4 0 0 0 0.2 -0.2 0 -0.2 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 0.9
K -0.1 -0.2 0 -0.1 0.5 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1
R -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 -0.1 0.4 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.2 -0.1 0 0 -0.1
Q 0.2 -0.2 0 -0.2 0.2 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0.3 -0.1 0 -0.1
S -0.1 0.5 0.2 -0.1 -0.3 -0.1 0 -0.1 0 0 0 0 0 0 0 0.1 0.4 0.1 0 0
T -0.4 0.1 0 -0.4 0.2 0.6 0 0 0 0 0 0 0 0 0 0.2 -0.1 -0.1 0 -0.1
G -0.2 0.9 0.2 -0.2 -0.2 -0.2 0 0.1 0 0 0 0 0 0 0 0.1 -0.2 -0.1 0 0.1
P -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.1 -0.4 -0.1 0 0.2 0.2 0 -0.1 0 0 0 0 0 0 0 0 -0.2 -0.1 0 0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0007 0.6 0.1 1 0.6 0.6 0.5 -0.7 -0.5 -0.7 -0.3 -0.4 -0.6 -0.7 -0.2 -0.2 0.8 -0.1 0.3 -0.7 0
0125 1 0.6 -0.1 1.2 0.4 0.8 -0.5 0.2 -0.5 -0.6 -0.7 -0.7 -0.5 -0.5 -0.7 0.6 0.8 0.3 -0.7 0.1
Select residue pair below:
i_j Score Prob
0007_0131 2.008 1.00
0007_0122 1.095 0.94
0007_0134 0.595 0.38
0007_0149 0.584 0.36
0007_0114 0.543 0.30
0007_0125 0.518 0.27
Local Interactions:
i_j Score Prob
0007_0008 0.882 0.80
0006_0007 0.717 0.58
0005_0007 0.521 0.27
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0108 seconds.