May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0007] and [I:0008]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 0.8 0.5 0.2 -0.3 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 0 0.3 -0.1
F -0.1 0 -0.4 0.8 0.1 -0.3 0 0 0 0 0 0 0 0 0 -0.1 0.4 0 0 -0.1
I 0.8 0.2 0.2 -0.1 0.6 -0.1 0 0 0 0 0 0 -0.1 -0.1 0 -0.3 -0.1 0 -0.2 -0.1
L -0.4 -0.2 0.8 0.4 0.4 0.5 0 0 0 0 0 0 -0.1 -0.1 0 -0.3 -0.2 0 -0.2 0.1
V -0.1 0.2 0 0.1 0.7 -0.2 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 0 -0.1 -0.1
M 0.5 -0.1 0.6 -0.6 0.4 -0.1 0 0 0 0 0 0 0 -0.1 0 0.3 -0.1 0 -0.1 -0.1
W 0 0 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0.2 -0.1 0 0.3 -0.1
K 0 0 0 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1
H 0 0 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.5 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0
Q 0 0 0.2 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 -0.1 -0.1 0 -0.1 0.5 0 0 0 0 0 0 0 0 0 0.1 -0.1 0 0.3 0.1
T 0 0 0 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 0 0.6 -0.2 -0.6 -0.1 0 0 0 0 0 0 0.3 0.2 0 0.2 0 0 0 0
P 0 0 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0.2 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0007 0.6 0.1 1 0.6 0.6 0.5 -0.7 -0.5 -0.7 -0.3 -0.4 -0.6 -0.7 -0.2 -0.2 0.8 -0.1 0.3 -0.7 0
0008 0.3 -0.1 0.9 1.1 1.4 0.6 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.2 -0.2 -0.5 -0.1 -0.2 -0.5 0 0
Select residue pair below:
i_j Score Prob
0008_0114 1.216 0.97
0008_0038 0.891 0.81
0005_0008 0.732 0.60
0008_0086 0.642 0.45
0008_0122 0.629 0.43
0008_0116 0.500 0.25
Local Interactions:
i_j Score Prob
0008_0010 0.956 0.87
0007_0008 0.882 0.80
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.0142 seconds.