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Coupling matrix for [N:0006] and [M:0112]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.2 0.5 0.9 -0.1 0.7 0.2 0.3 -0.2 -0.7 -0.7 -0.2 -0.2 -0.1 -0.4 -0.7 1 -0.2 -0.2 -0.2
F -0.1 0 -0.1 -0.1 -0.1 0 0 0 0.4 -0.2 0.5 0 -0.1 0.2 -0.2 -0.1 -0.2 0 -0.1 0
I 0 -0.1 -0.2 -0.4 -0.1 -0.1 -0.1 -0.1 0.7 -0.5 0.9 -0.1 0.2 0.4 -0.5 0 0.2 0.2 0.3 -0.1
L 0.3 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.1 -0.2 0.5 0.3 -0.2 0.2 0 -0.1 -0.3 0 -0.1 0
V 0.1 -0.1 0.2 -0.4 0.9 -0.1 0 -0.1 -0.9 -0.2 0 0.7 -0.1 -0.5 0.1 0.1 0.8 -0.1 0.2 0.1
M -0.1 0 -0.1 0.1 -0.1 0 0 0 0 -0.2 -0.2 -0.3 0.3 -0.2 0.1 -0.1 0.1 0 0.5 0
W 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0 -0.1 0 0 0
Y -0.1 0 0.3 0.3 -0.1 0 0 0 0.6 -0.3 -0.2 0 -0.1 0.1 -0.2 -0.1 -0.3 0 -0.1 0
D 0.6 0 -0.1 -0.1 -0.1 0 0 0.4 0.1 -0.1 -0.3 0.2 -0.1 -0.2 0.1 -0.1 -0.2 0 -0.1 0
E -0.1 0 -0.2 -0.2 -0.2 -0.1 0 -0.1 -0.8 -0.8 0.3 1.4 0.1 -0.3 -0.1 -0.2 -0.2 0 0.9 0.4
K -0.2 0.2 0.2 0.1 0.5 -0.1 -0.1 -0.2 0.9 1.3 -0.6 -1 0.1 -0.4 -0.2 0.3 -0.3 -0.2 -0.2 -0.1
R 0.2 -0.1 0.1 0.2 0.4 0.3 0 -0.2 0.5 -0.1 -0.4 -0.6 -0.2 -0.2 0.3 -0.2 -0.2 0.2 -0.1 0
H -0.1 0 0.3 0.3 0.3 -0.1 0 -0.1 0.5 0.1 -0.2 -0.5 -0.1 -0.2 0.1 -0.1 -0.2 0 -0.1 0
N -0.3 -0.1 0 -0.1 -0.1 -0.1 -0.1 0.1 0.8 0.7 0.6 -1.2 -0.2 0.2 0.1 0.1 -0.2 -0.1 0 -0.1
Q 0 0.2 -0.2 -0.1 -0.1 -0.1 0 -0.1 0 -0.4 0.2 0.1 -0.3 0.1 0.1 0.5 0.1 0.2 -0.2 0
S -0.1 -0.2 -0.2 0 0.1 -0.2 -0.1 0.1 -0.8 1.4 0.1 -0.1 0.4 0.5 0.3 0.2 0.1 -0.2 -0.7 -0.1
T -0.3 -0.1 -0.4 -0.4 -0.2 -0.2 -0.1 -0.1 -0.2 0.7 -0.1 1 0.3 0.3 0.3 0.1 -0.1 -0.1 0.2 -0.1
G 0.2 0.1 0.1 0.4 -0.5 0.1 -0.1 -0.1 -0.1 -0.2 -0.2 0 -0.1 0.3 0.1 0.3 -0.1 0.1 -0.1 -0.1
P 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.2 0.6 -0.1 -0.1 -0.1 0 -0.1 0 0 0
C -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.4 0 0.2 0.2 -0.1 -0.2 0.2 -0.1 0.7 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0006 1 -0.4 0.7 0.2 1 -0.4 -1.1 -0.5 -0.4 -0.1 0 0.1 -0.3 0.3 -0.2 0.4 0.6 0.1 -0.9 -0.3
0112 0 -0.9 -0.1 0.1 0.2 -0.8 -1.1 -0.7 0.9 1.4 1 0.5 -0.3 0.8 0.6 0.1 0.5 -0.8 0.3 -0.9
Select residue pair below:
i_j Score Prob
0006_0112 1.735 1.00
0049_0112 1.317 0.99
0112_0133 1.005 0.90
0112_0122 0.541 0.30
Local Interactions:
i_j Score Prob
0112_0114 1.173 0.96
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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