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Coupling matrix for [V:0105] and [H:0106]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.2 0.2 -0.4 0 -0.3 -0.1 -0.1 0 -0.5 -0.1 -0.1 0.5 -0.4 0.3 1.6 -0.1 -0.1 0 -0.1
F -0.2 -0.1 -0.2 -0.2 -0.2 -0.1 -0.1 -0.1 0 0.8 0 -0.1 -0.4 1.7 -0.2 -0.3 -0.1 -0.1 0 0
I -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0 0 0 0.4 0 0 0.2 -0.3 0.6 0 -0.1 -0.1 0 0
L -0.3 -0.1 0.2 0.3 -0.1 -0.2 -0.1 0.3 0 1.4 -0.1 -0.1 -0.6 0.5 0 -0.5 -0.1 0.3 0 -0.1
V 0.2 0.2 -0.3 -0.3 -0.4 0.1 -0.1 0.2 -0.1 0.7 0.3 -0.1 0.1 -0.8 0.9 0.2 0 -0.2 -0.1 0.1
M -0.1 -0.1 0 0.3 -0.1 -0.1 0 0 0 0 0 0 -0.2 -0.1 0.6 -0.1 0 0 0 0
W -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0 -0.2 0 0 -0.2 0.9 -0.1 -0.2 0 0.4 0 0
Y -0.1 0 0 -0.1 -0.1 0 0 0 0 -0.1 0 0 0.6 0.2 -0.2 -0.1 0 0 0 0
D 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0 0 0
E 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0 0 0
K 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0.4
R 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0 0 0
H 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0 0 0
N 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0 0 0
S 1.1 0.5 0.4 -0.4 -0.1 0.2 0.4 -0.1 0 -0.5 -0.1 -0.1 0.5 -0.5 -0.6 0.1 0.3 -0.1 0 -0.1
T -0.1 -0.1 -0.2 0.5 0.6 0.6 -0.1 -0.1 0 -0.5 -0.1 -0.1 0.8 -0.5 -0.4 0.4 -0.2 -0.1 0 -0.1
G -0.1 0.2 0 -0.1 -0.1 0.4 0 0 0 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0
P -0.1 0 0.4 0 0 0 0 0 0 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0
C -0.1 -0.1 0.1 1.2 0.6 -0.1 0 0 0 -0.3 0 0 -0.1 -0.2 -0.2 -0.4 -0.1 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0105 0.8 0.6 0.2 1 1.4 -0.1 0 -0.3 -0.7 -0.7 -0.4 -0.7 -0.7 -0.7 -0.7 1.3 0.8 -0.4 -0.4 0.2
0106 0.5 0.1 0.4 0.4 0.1 0.4 -0.3 -0.2 -0.6 0.8 -0.4 -0.4 0.7 0.2 0.2 -0.2 -0.1 -0.2 -0.6 -0.2
Select residue pair below:
i_j Score Prob
0072_0106 1.861 0.99
0106_0113 1.085 0.66
0106_0109 1.038 0.61
0031_0106 0.997 0.57
0077_0106 0.878 0.43
Local Interactions:
i_j Score Prob
0105_0106 1.117 0.69
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
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