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Coupling matrix for [K:0055] and [E:0139]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0 -0.1 -0.1 -0.1 0 0 0 -0.2 -0.4 -0.2 0.8 -0.2 0.3 0.5 -0.1 -0.1 -0.1 -0.1 0
F 0.7 0 0 0 0 0 0 0 -0.2 -0.3 -0.1 -0.1 0.4 -0.2 -0.3 0 0 0 0 0
I 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.2 0 0 0 0 0
L -0.1 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0.5 -0.1 -0.1 -0.2 0 0 0 0 0
V -0.1 0 0 0 0 0 0 0 0.3 -0.2 -0.1 0 -0.1 -0.1 0.1 0 0 0 0 0
M 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.2 0 0 0 0 0
W -0.1 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 -0.1 0.7 -0.3 0 0 0 0 0
Y -0.1 0 0 0 0 0 0 0 0.2 -0.2 -0.1 0 -0.1 0.1 0.2 0 0 0 0 0
D -0.3 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.2 -0.2 0.5 -0.1 0.4 -0.3 -0.3 -0.1 0.9 -0.1 0.6 0
E -0.1 0 0 0 0 0 0 0 -0.1 -0.2 0.4 0 -0.1 0.4 -0.3 0 0 0 0 0
K -0.4 0 -0.2 0.2 0.3 -0.1 0 0 0.5 2 -0.3 -0.2 -0.4 -0.2 0.2 -0.2 -0.2 -0.2 -0.2 0
R 0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.3 1.8 -0.3 -0.1 -0.2 0.1 0.5 -0.1 -0.1 -0.1 -0.1 0
H -0.3 0 -0.1 0.7 0.3 0.4 0 0 -0.3 0.2 -0.3 -0.1 0.1 -0.3 0.6 -0.1 -0.1 -0.1 0.1 0
N -0.3 -0.1 0.3 0.3 0.2 -0.2 -0.1 -0.1 0.7 0.1 0.1 -0.4 -0.7 -0.2 0.7 0.3 -0.4 1 -0.3 -0.1
Q 0.4 0 0.7 -0.1 -0.1 -0.1 0 0 -0.1 -0.4 -0.3 -0.1 0.1 0.3 0.4 -0.1 -0.1 -0.1 -0.1 0
S 1.1 0 -0.1 -0.1 -0.1 0 0 0 -0.3 -0.5 0.2 -0.1 -0.2 0.1 0.1 0.4 -0.1 -0.1 -0.1 0
T -0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.1 0.6 -0.3 0 0 0 0 0
G -0.6 -0.1 -0.3 -0.2 -0.3 -0.2 -0.1 -0.1 0.7 -0.4 0.9 0 0.8 -0.6 0.4 0.3 0.6 0 0.1 -0.1
P -0.1 0 0 0 0 0 0 0 0.3 0.2 -0.1 0 -0.1 -0.1 -0.2 0 0 0 0 0
C 0.3 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.2 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0055 0.2 -0.4 -1.1 -0.8 -0.7 -1.1 -0.6 -0.5 0.7 -0.6 1.2 0.7 0.7 2 0.8 0.3 -0.7 2.1 -0.7 -0.8
0139 0.6 -0.8 -0.4 -0.1 -0.2 -0.7 -0.8 -0.8 0.7 1.1 0.3 -0.2 0.3 0.8 1.6 -0.2 0 -0.3 -0.3 -0.8
Select residue pair below:
i_j Score Prob
0055_0139 1.705 0.97
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
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