May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
BtS2R Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0032] and [V:0033]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 0.9 1.1 0.6 -0.4 -0.1 -0.3 -0.1 -0.1 -0.2 -0.1 0.3 -0.1 -0.1 -0.2 -0.5 -0.2 -0.1 0.3
F 0.4 -0.1 -0.2 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
I 0.1 -0.4 0.4 0.3 0.3 -0.1 0 -0.1 0 0 -0.1 0 -0.1 0 0 0.1 0.3 -0.1 0 -0.1
L 0.6 -0.4 -0.3 0 0.1 -0.1 0 -0.2 0 0 -0.1 0 -0.1 0 0 0.4 0.8 -0.1 0 0.1
V 0.3 0.3 0.6 -0.5 0.9 -0.2 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 0.3 -0.1 -0.2
M -0.1 -0.2 -0.3 -0.3 0.5 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.7
W -0.1 -0.1 -0.1 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Y -0.1 0.5 0.3 0.1 -0.3 0 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
D -0.1 -0.5 0.1 0 -0.3 0 0 0.4 0 0 0.7 0 -0.1 0 0 0 0.3 0 0 -0.2
E 0.2 0.5 -0.3 -0.4 0.1 0 0 0.3 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
K 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0.3 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 0.7 -0.2 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
N 0.3 -0.2 -0.2 -0.3 -0.2 0.5 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.1
Q -0.1 0.5 -0.2 -0.3 0.2 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1
S -0.2 -0.2 0.5 0.3 0.6 -0.1 0 -0.1 0 0 -0.1 0 -0.1 0 0 -0.1 -0.2 -0.1 0 0
T 0 -0.1 0.2 0 -0.1 0.4 0 -0.2 0 0 -0.1 0 -0.1 0 0 0 -0.1 -0.1 0 0.8
G -0.2 -0.1 0.1 0 0.3 -0.1 0 0.7 0 0 -0.1 0 0 0 0 -0.1 -0.2 0.4 0 -0.2
P -0.4 0.9 -0.3 1.6 -0.5 0.2 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 0.7 -0.1 -0.1 -0.4
C 0.3 -0.2 0.2 0.2 -0.4 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0032 1.4 -0.6 0.2 0.6 0.9 -0.1 -0.6 -0.1 -0.1 -0.2 -0.8 -0.6 -0.5 -0.4 -0.5 0.1 0.5 0.3 1 -0.2
0033 0.7 1.1 1.4 1.9 1.4 -0.1 -0.8 0 -0.8 -0.8 -0.4 -0.8 -0.5 -0.8 -0.8 -0.5 0.2 -0.3 -0.8 0.3
Select residue pair below:
i_j Score Prob
0033_0070 1.103 0.68
Local Interactions:
i_j Score Prob
0032_0033 1.244 0.80
0033_0034 0.843 0.39
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
Page generated in 0.0286 seconds.