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Coupling matrix for [L:0030] and [L:0078]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.2 0.1 0.3 0 -0.2 1 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 0.3 -0.1
F 0.4 1.7 -0.4 -0.2 -0.3 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 -0.1
I 0.3 -0.2 0.2 0.2 0.4 -0.1 -0.3 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.1
L 0.1 -0.4 0.4 0.8 0.4 0.8 -0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.5 -0.2 -0.3
V -0.1 -0.2 0.4 0.1 -0.4 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1
M -0.1 -0.2 -0.2 -0.1 0.1 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.7 0.1 0
W 0 0 0 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 -0.1 -0.1 0.3 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 -0.1 -0.1 0.1 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.4 0 0
H 0 0 0 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.2 0.4 -0.3 0.4 0.1 0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.5
T 0.4 -0.2 0.2 -0.1 0.6 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1
G -0.1 0.2 -0.2 0.2 0.1 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
P -0.1 -0.1 -0.1 0 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.5 0 0
C 0.1 -0.2 0.4 -0.1 0.5 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0030 1.4 0.6 0.3 1.1 0.1 0.1 -0.7 -0.7 -0.7 -0.4 -0.5 -0.3 -0.7 -0.7 -0.7 0.9 0.5 0.5 -0.3 0.2
0078 0.9 0.8 0.5 2.2 1.2 0.1 0.4 -0.4 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.3 0.2 -0.3 0
Select residue pair below:
i_j Score Prob
0022_0078 2.264 1.00
0025_0078 1.490 0.93
0026_0078 1.448 0.91
0030_0078 0.788 0.33
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
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