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Coupling matrix for [G:0005] and [A:0006]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0 -0.1 -0.3 0.4 -0.2 -0.1 0 0 -0.1 -0.1 -0.2 -0.1 0.2 0.8 -0.4 -0.3 0.3 0.6 -0.1
F 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.5 0.4 -0.1 -0.1 0.3
I 0 0.6 0 0.2 -0.1 0.3 0.5 -0.1 -0.1 -0.1 -0.2 -0.3 -0.1 -0.3 -0.3 0.2 0.1 -0.1 -0.2 0.2
L -0.3 -0.4 0.4 0.6 -0.1 -0.4 0.2 -0.1 -0.1 -0.2 0.7 0.7 0.2 0.2 -0.7 0.5 0.2 -0.3 -0.3 -0.2
V -0.1 -0.1 0 0.4 -0.1 0 -0.1 0 0 0 0 -0.1 0 0 0.4 -0.1 -0.1 0 -0.1 0.3
M 0.1 0.4 -0.1 0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 0.3 0 -0.1 -0.1 0.5 -0.2 -0.1 -0.1 -0.1
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 0 0.8 -0.2 -0.1 0.2 0 0.2 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0.4 -0.1 0.3 -0.1 0 -0.1 0
K -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 0.3 0.1 0 0.6 0
R 0.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 0 -0.1 -0.1 -0.1 0.2 0.4 -0.1 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0
Q -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0.4 -0.1 0.6 0 -0.1 0.6 -0.2 -0.3 0 -0.1 0
S 0.1 0.6 -0.1 -0.2 0 -0.1 0.2 0 0 -0.1 -0.1 -0.2 -0.2 -0.2 0.1 -0.2 0.2 -0.1 0.7 -0.1
T 0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 0 0 0 -0.1 -0.2 0 -0.1 0.2 0.2 0.3 -0.1 -0.1 0
G 0.1 -0.2 0.3 -0.2 0.3 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0.4 -0.2 0.1 0.3 -0.1 -0.1
P -0.1 -0.1 0 -0.1 0.3 0 0 0 0 0 0 0.4 0.4 0 -0.1 -0.1 -0.2 0 -0.1 0
C 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0005 0.3 0.1 0.1 0.2 0.1 0.1 -0.4 0 -0.4 -0.1 0 0.1 -0.4 -0.3 0.1 0.1 0.1 0.3 -0.1 -0.2
0006 0.7 0.5 -0.2 0.6 0.4 -0.3 0.1 -1 -1 -0.6 0 0.1 -0.7 0.1 0.2 0.8 0.8 -0.5 0.2 -0.4
Select residue pair below:
i_j Score Prob
0005_0009 1.177 0.75
0002_0005 1.081 0.66
0005_0008 0.942 0.50
0005_0012 0.926 0.48
0005_0011 0.876 0.43
0001_0005 0.823 0.37
0005_0013 0.735 0.28
0005_0169 0.728 0.27
Local Interactions:
i_j Score Prob
0004_0005 1.439 0.91
0005_0006 1.062 0.64
0005_0007 0.854 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
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