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Coupling matrix for [G:0002] and [G:0005]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0.2 0.3 -0.2 0.2 -0.1 0 0 0 0 -0.1 0.5 0 -0.1 0.4 -0.2 0.1 -0.2 0 0
F 0 0 0.2 -0.4 0 0 0 0 0 0 0.3 0 0 0 0 0 -0.1 0 0 0
I 0 0 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 -0.1 -0.2 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 -0.1 0.1 0.4 0 0.1 0 0 0 0 -0.1 0 0 0 -0.1 0 -0.1 0 0 0
M -0.2 0.5 0.5 -0.6 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0.3 0.2 0.1 -0.1 0.2 -0.1 0
W 0 0 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.2 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0.3 0 -0.1 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.3 0.5 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0.3 0 0 0
R -0.1 -0.1 -0.4 0.9 -0.1 -0.1 0 0 0 0 -0.1 0 0 0 -0.1 0.1 0.3 0.1 0 0
H -0.1 0 0.2 -0.3 0 0 0 0 0 0 0.3 0 0 0 0 0 0 0 0 0
N 0 0 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0.1 -0.1 -0.1 0 0
Q -0.1 -0.1 -0.2 0.4 0 -0.1 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.4 0 0
S -0.1 0 0.5 -0.2 0 0.2 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0
T -0.1 -0.1 0.1 0 0 0.2 0 0 0 0 0 0 0 0 0.4 -0.1 -0.1 -0.1 0 0
G 0.3 -0.1 0.1 -0.2 0 -0.1 0 0 0 0 -0.1 -0.1 0 0 -0.1 0.3 0 0.4 0 0
P -0.1 0.3 -0.2 0.6 0.4 -0.1 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0
C 0 0 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0002 0.9 -0.3 -0.3 -0.3 0.2 0.2 -0.7 -0.5 -0.7 -0.4 0.2 0.6 -0.2 -0.3 0.1 0.1 0.2 0.5 0.5 -0.7
0005 0.3 0.1 0.1 0.2 0.1 0.1 -0.4 0 -0.4 -0.1 0 0.1 -0.4 -0.3 0.1 0.1 0.1 0.3 -0.1 -0.2
Select residue pair below:
i_j Score Prob
0002_0005 1.081 0.66
Local Interactions:
i_j Score Prob
0001_0002 1.734 0.98
0002_0004 1.511 0.93
0002_0003 1.389 0.89
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
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