OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [D:0319] and [Q:0321]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	-0.3	0.3	-0.1	0.1	0	-0.1	0.5	0.3	0.8	0.2	-0.1	-0.3	-0.1	-0.2	0.1	-0.2	0.2	-0.6	0.2
F	0.4	0	-0.1	-0.1	-0.2	-0.1	-0.1	0.2	-0.3	-0.5	-0.2	-0.3	-0.1	0	-0.3	0.2	0.6	0	0.5	-0.1
I	0	0.5	0.9	-0.1	0	-0.1	-0.1	-0.1	-0.2	-0.3	0.2	-0.2	-0.2	0.3	-0.3	0.1	-0.3	-0.4	0.1	-0.1
L	-0.2	-0.5	-0.6	-0.7	-0.4	-0.1	-0.2	-0.4	0.3	-0.1	0.1	0.6	-0.4	0.1	0.4	0.2	0.7	0	0.2	0
V	-0.5	0	-0.5	-0.3	-0.3	0.2	-0.1	-0.2	0.2	0	0.3	0	0.2	-0.3	0.6	-0.1	-0.2	-0.2	0.5	-0.1
M	0.2	-0.2	-0.2	0	0.3	-0.1	-0.1	-0.1	-0.1	-0.4	0.4	-0.1	-0.2	-0.1	-0.3	-0.2	0	-0.3	-0.1	0.1
W	-0.2	-0.1	0.1	-0.1	0.1	-0.1	0	-0.1	-0.1	0.5	0.1	0	-0.1	-0.1	-0.1	0	-0.3	-0.2	-0.1	0
Y	-0.1	-0.2	-0.5	-0.5	0.4	-0.2	-0.1	0	0.3	0.6	0.8	-0.3	0.2	-0.2	-0.1	-0.6	0	0.1	0.3	-0.1
D	0.2	0.1	0.1	0.2	0.2	0.8	0.1	0	-1	-0.5	0.2	0.4	0.1	0.3	0.6	0.8	0.9	-0.3	-2.2	0.7
E	0.2	0.2	0.6	0.1	0.6	-0.7	-0.2	0	-0.6	-0.3	-0.1	0.7	0.3	0	-0.1	0	0.1	0.3	-0.4	0
K	-0.1	0.2	0.4	0.1	-0.1	0.5	-0.2	0.1	0.1	-0.1	-0.2	-0.2	-0.3	0.2	0.2	0.1	-0.2	0	0.5	-0.4
R	-0.2	0.7	-0.4	-0.5	-0.9	0	0.2	-0.3	0.1	-0.4	0	0.7	0.1	-0.1	-0.4	-0.2	0	0.2	0.5	0.4
H	-0.1	-0.2	-0.5	-0.3	-0.3	-0.4	-0.1	-0.3	0.3	-0.1	-0.4	0.2	1.7	-0.2	-0.4	-0.3	0.2	0.3	1.5	-0.3
N	-0.1	0.1	0.3	0.3	-0.3	0.1	0.1	0	0.3	0.7	0.1	-0.1	-0.4	0.1	0	0.2	0.3	0	-0.1	0.1
Q	0	-0.2	0.3	0.1	0.1	-0.5	-0.4	-0.4	-0.1	0.2	0.4	0	-0.4	0.2	0.5	0.3	0.3	0.3	0	-0.1
S	0	0.4	-0.1	0.1	0.3	-0.1	0	0.9	0.3	0	0	0.4	0.1	0.1	-0.2	-0.1	0	0.2	-0.2	-0.1
T	-0.1	-0.2	-0.4	0.5	-0.4	-0.2	0.4	-0.3	0.1	0.2	0	-0.2	-0.1	0.1	0.1	0.3	-0.4	0.1	-0.2	0.2
G	0.3	0	0.1	0.6	0.8	0.1	-0.5	-0.4	-0.3	0.3	-0.2	-0.3	0	-0.3	0.3	0.3	-0.1	0.1	-0.5	-0.1
P	0.5	0	0.2	0.2	-0.4	0.1	-0.1	-0.2	0.1	-0.1	-0.4	0	0	-0.1	-0.2	0.3	0	-0.3	0	-0.1
C	0	-0.2	0.2	-0.1	0.2	-0.1	-0.1	-0.1	-0.1	-0.4	0.3	-0.2	0.3	-0.2	0.2	-0.2	-0.2	0.3	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0319	0.3	-1.1	-0.6	-0.5	-0.8	-1.3	-1.4	-0.4	1.9	1.1	0.2	0	-0.3	1.2	0.2	1.4	0.5	1	-0.8	-1.1
0321	0.7	-0.5	-0.2	-0.1	0.1	-0.8	-1.9	-0.9	0.1	0.3	0.9	0.9	-0.1	0.2	0.3	1.1	1.2	0.8	-0.9	-0.4

Select residue pair below:

i_j	Score	Prob
0296_0319	1.022	0.93
0319_0323	0.950	0.90
0315_0319	0.657	0.53

Local Interactions:

i_j	Score	Prob
0317_0319	2.312	1.00
0319_0321	1.332	0.99
0319_0320	0.566	0.38

See all coupling residues
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