OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0316] and [V:0322]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	1.1	0.6	0.7	0.5	0.8	0.3	-0.1	-0.7	-0.1	-0.2	-0.3	-0.9	-0.7	-0.3	-0.5	1	0	-0.2	-0.7	0.9
F	-0.1	-0.4	-0.4	-0.7	-0.2	-0.1	-0.1	0.3	0.4	0.1	0.8	0.3	-0.1	0	-0.1	0.6	0.5	0.3	-0.2	-0.6
I	-0.7	0.2	-0.3	0.6	-0.2	0.2	0.3	0.6	-0.2	-0.1	0.3	0.2	-0.2	-0.1	0.1	-0.2	0.1	0.1	0.2	-0.2
L	-0.6	0.3	-0.2	0.4	-0.2	0.6	0.1	0	0.1	-0.1	0.1	0.5	0.3	-0.1	-0.2	-0.1	-0.8	-0.2	-0.3	0.9
V	0.5	1	0.2	0.5	-0.1	0.6	-0.1	-0.2	0	0	-0.4	-0.5	-0.1	-0.1	-0.4	-0.1	-0.1	0.2	-0.4	0.1
M	0.2	0.1	-0.1	-0.1	-0.2	-0.1	0	-0.1	0	0.2	0	0.1	-0.1	0	0.1	0	-0.3	0.1	-0.1	-0.2
W	0.2	-0.4	-0.6	1.1	-0.5	-0.2	0	-0.1	0.2	0	0	0	0	0	0	-0.1	0.2	0.1	-0.1	-0.1
Y	-0.4	0.1	0.2	-0.1	0.3	-0.3	0	-0.1	0	0	0	0.2	-0.1	0	-0.1	-0.2	0.1	-0.1	0.2	-0.3
D	-0.6	0.6	0	0.5	0	-0.2	0	-0.1	-0.1	0	-0.1	0	-0.1	0	-0.1	-0.3	-0.1	0.1	-0.1	-0.4
E	1.1	-0.1	-0.9	-0.3	-0.6	-0.3	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	0	-0.1	0.5	0.4	0.6	0	-0.1
K	0.1	0.1	-0.2	-0.3	-0.1	-0.2	0	0.2	0.2	0	0	0	0	0	0	-0.1	0.1	0	0	-0.1
R	-0.5	-0.3	-0.4	0	-0.3	0.5	0	-0.1	0	0.1	0	-0.1	0	0	-0.1	0.2	-0.3	-0.1	0.7	0
H	-0.4	-0.5	1.5	0.1	0.8	0	0.1	-0.2	-0.1	-0.1	0.1	0.1	-0.1	-0.1	-0.1	-0.5	-0.5	-0.2	0.4	-0.6
N	-0.4	-0.4	0.2	-0.3	0.2	-0.3	0	-0.1	0	0.2	-0.1	-0.1	-0.1	0.2	0.2	0.1	-0.4	-0.1	0.4	-0.3
Q	0.1	-0.2	-0.2	-0.4	0	-0.1	0	0	0	0	0	0	0	0	0.2	-0.1	0	0	0.2	-0.1
S	0.1	0.1	0.7	-0.1	0.5	-0.6	-0.4	-0.3	-0.2	-0.1	0.3	-0.1	0.3	0	0	-0.3	0.4	-0.4	0.2	-0.1
T	0.4	0.9	0.1	0	0.1	0	0	0	0	-0.2	0.1	0.5	0	0	0.1	-0.7	0.1	-0.2	-0.3	-0.3
G	0.9	-0.5	1.1	0.7	1.2	0.3	-0.2	0	-0.3	-0.6	-0.7	-0.6	-0.7	0.3	-0.3	-0.3	0.9	0	-0.5	0.8
P	-0.4	0	-0.5	0.1	-0.3	-0.2	0.2	0	0	0	0	0.1	0	0	0	0.6	-0.2	0	0.5	-0.2
C	0.5	0	0.7	0.1	0.8	0.3	-0.4	0.5	-0.2	-0.3	0	-0.7	0.8	-0.3	-0.2	0.3	0.2	-0.1	-0.3	-0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0316	1.3	0.3	0.3	0.5	0.9	-0.9	-1.2	-0.9	-0.6	-1	-1.2	-0.7	-1.1	-0.6	-1	1.5	1.1	1.6	-1.1	1.3
0322	1.2	1	2.6	2.7	2.9	0.5	-1.5	-1	-1.5	-1.9	-1.2	-1.1	-1.1	-1.6	-1.5	-0.1	0.7	-0.7	-0.8	0.3

Select residue pair below:

i_j	Score	Prob
0045_0322	0.865	0.83
0316_0322	0.835	0.80

Local Interactions:

i_j

Score

Prob

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